Pairwise Alignments

Query, 546 a.a., type II/IV secretion system ATPase subunit from Methanococcus maripaludis S2

Subject, 521 a.a., general secretion pathway protein E (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 58.2 bits (139), Expect = 8e-13
 Identities = 45/117 (38%), Positives = 61/117 (52%), Gaps = 8/117 (6%)

Query: 296 IFICGETASGKTTSLNAILPFIKPK-SKIFSCEDTSEVKPPNPVWQQLLTRERGPEESRV 354
           I + G T SGK+T+L A L  I  K + I + ED  E +       Q+ T+      + +
Sbjct: 278 ILVTGPTGSGKSTTLYAGLTEINSKDTNILTVEDPIEYELEGIGQTQVNTK------ADM 331

Query: 355 TLFDLLRAALRSRPNYIIVGEIRSVEGA-VAFQAMQTGHPVISTFHAANVRKMIQRL 410
           T    LRA LR  P+ +++GEIR +E A +A QA  TGH VIST H       I RL
Sbjct: 332 TFARGLRAILRQDPDVVMIGEIRDLETAQIAVQASLTGHLVISTLHTNTASGAITRL 388