Pairwise Alignments

Query, 546 a.a., type II/IV secretion system ATPase subunit from Methanococcus maripaludis S2

Subject, 356 a.a., type II secretion system protein E (RefSeq) from Shewanella sp. ANA-3

 Score = 80.1 bits (196), Expect = 1e-19
 Identities = 61/210 (29%), Positives = 102/210 (48%), Gaps = 16/210 (7%)

Query: 207 EGDISNYLKNMCERIGRPVSDATPIVDGSLPD-GSRINILYSGDVSLKGPSFTIRKFTDV 265
           E D    ++ +   +G  V    P++   LP+ G R   +     +  GP+F +RK    
Sbjct: 72  EADGERIIRLVAAHVGAEVHRGQPLLTAELPETGERFEGILPP--AAPGPAFALRKRAVN 129

Query: 266 PISITQIISWGTMSAQTAAYLWLCLEYGMSIFICGETASGKTTSLNAILPFIKPK-SKIF 324
            I + Q ++ G ++A  A +L   +    ++ I G T++GKTT  NA+L  I     ++ 
Sbjct: 130 IIGLDQYVADGILTAGQADFLRRAVRERQNVLIAGGTSTGKTTLANALLAEIAATGDRVL 189

Query: 325 SCEDTSEVKPPNPVWQQLLTRERGPEESR---VTLFDLLRAALRSRPNYIIVGEIRSVEG 381
             EDT E+        Q   R+  P  +R   V++ +L+RA +R RP+ ++VGE+R  E 
Sbjct: 190 VLEDTIEL--------QCAARDHVPLRTRAGVVSMQELVRATMRLRPDRVVVGEVRGGEA 241

Query: 382 AVAFQAMQTGHP-VISTFHAANVRKMIQRL 410
               +   TGHP  I+T HA +    + RL
Sbjct: 242 LDLIKVWGTGHPGGIATIHAGSALGALLRL 271