Pairwise Alignments

Query, 210 a.a., flagellin from Methanococcus maripaludis S2

Subject, 216 a.a., flagellin from Methanococcus maripaludis JJ

 Score =  168 bits (426), Expect = 6e-47
 Identities = 97/215 (45%), Positives = 142/215 (66%), Gaps = 7/215 (3%)

Query: 2   VKKFMKSKKGAVGIGTLIIFIAMVLVAAIAASVIINTAGKLQHKASTVGEESTEQVASGI 61
           + +FMK+KKGA GIGTLI+FIAMVLVAA+AASV+INT+G LQ KAST G++STEQVASG+
Sbjct: 3   ITEFMKNKKGASGIGTLIVFIAMVLVAAVAASVLINTSGYLQQKASTTGKDSTEQVASGL 62

Query: 62  QVLKVIGHAD--TKTTIDKLAVMVAPNVG-GEIDLSTTILTLGTGDAKYSLVYDSTQH-N 117
           Q++ + G+ D      I KLA+ + PN G   ID++  +LTL  G  K    YD+T + N
Sbjct: 63  QIMGISGYQDGSAGANITKLAIYITPNAGSAAIDMNQVVLTLSDGSTKTVTKYDTTAYTN 122

Query: 118 ADVKDD-GSDSIFDETEWGSGSKYGLIVLQDSDNSTAEATHPTINYGDKVYITVT-MDVN 175
                D  + +  + ++    +++G++ +QD+D S   +  P IN GD V I V+ +  +
Sbjct: 123 LTAGGDLYNTTTVNWSKLADTTEFGIVEIQDADLSFTSSA-PVINKGDIVAIIVSGVSFD 181

Query: 176 STSKVSGEVIPDYGASGIVEFRAPSVFTETVVTLQ 210
           +  ++SG V P++GA G++ F  PS FTE VV+LQ
Sbjct: 182 TRMEISGSVQPEFGAPGVISFTTPSTFTEKVVSLQ 216