Pairwise Alignments

Query, 211 a.a., flagellin from Methanococcus maripaludis S2

Subject, 216 a.a., flagellin from Methanococcus maripaludis JJ

 Score =  198 bits (504), Expect = 5e-56
 Identities = 128/222 (57%), Positives = 152/222 (68%), Gaps = 17/222 (7%)

Query: 1   MKITEFMKSKKGASGIGTLIVFIAMVLVAAVAASVLINTSGFLQQKASTTGKESTEQVAS 60
           MKITEFMK+KKGASGIGTLIVFIAMVLVAAVAASVLINTSG+LQQKASTTGK+STEQVAS
Sbjct: 1   MKITEFMKNKKGASGIGTLIVFIAMVLVAAVAASVLINTSGYLQQKASTTGKDSTEQVAS 60

Query: 61  GLLINGIT----GSVGTSDVKLLAIYLAPNAGSSAIDLAQTKVMLDYNGKSVVLGYG--G 114
           GL I GI+    GS G +  K LAIY+ PNAGS+AID+ Q  + L       V  Y    
Sbjct: 61  GLQIMGISGYQDGSAGANITK-LAIYITPNAGSAAIDMNQVVLTLSDGSTKTVTKYDTTA 119

Query: 115 NQDMSSG----NSSVFSNDTGATATTFQVNILQDYDDSAVDNA-VINKGDAVALIVDVNA 169
             ++++G    N++  +    A  T F +  +QD D S   +A VINKGD VA+IV    
Sbjct: 120 YTNLTAGGDLYNTTTVNWSKLADTTEFGIVEIQDADLSFTSSAPVINKGDIVAIIVS-GV 178

Query: 170 SFAGEIPERTAISGKVQPEFGAPGVISFTTPASYTTTLVELQ 211
           SF      R  ISG VQPEFGAPGVISFTTP+++T  +V LQ
Sbjct: 179 SF----DTRMEISGSVQPEFGAPGVISFTTPSTFTEKVVSLQ 216