Pairwise Alignments

Query, 302 a.a., aspartate carbamoyltransferase from Methanococcus maripaludis S2

Subject, 339 a.a., aspartate carbamoyltransferase (RefSeq) from Shewanella loihica PV-4

 Score =  242 bits (617), Expect = 1e-68
 Identities = 133/309 (43%), Positives = 194/309 (62%), Gaps = 17/309 (5%)

Query: 3   HLISMRDIGREEILNILDESERMEAILNEKGHCDFLNGRILATLFYEPSTRTRLSFETAM 62
           H++S+  +  + +  I   + RM      +     L+G IL  LF+EPSTRTR+SF +A 
Sbjct: 8   HILSVNQLNLDAVQEIFSVASRMTPYALRRKRTTVLDGAILGNLFFEPSTRTRVSFGSAF 67

Query: 63  KRLGGNVIGFTDISNTSVTKGESLADTIKVISGYSDLIAIRHPSEGAARLSSENSKVPVI 122
             LGG V     I  +S++KGESL DT +V+S YSD+IA+RHP   + R  +E S+VPVI
Sbjct: 68  NLLGGKVNETVGIGTSSLSKGESLYDTARVLSSYSDVIAMRHPDAYSVREFAEGSRVPVI 127

Query: 123 NAGDGSNQHPTQTLLDLYTIKREVG----HIENLKIAFIGDLKYGRTVHSLCQALSLFKG 178
           N GDG N+HPTQ LLDL+TI++E+      I  + IA +GDLK+GRTVHSL + L ++K 
Sbjct: 128 NGGDGPNEHPTQALLDLFTIQKELAAGGRSISGMHIAMVGDLKFGRTVHSLSRLLCMYKD 187

Query: 179 VEIKLISPDELKMPREVIEDIAG---KIKLSEMADVDIDDVDVVYMTRIQKERFVDVNEY 235
           V   LISP EL MP  VI+DI     KI +++  + ++D  D++Y+TRIQ+ERF    E 
Sbjct: 188 VSFTLISPKELAMPDYVIDDIENAGHKITITDQLEGNLDQADILYLTRIQEERFPSQEEA 247

Query: 236 YKVKGIYRLS----KEHIGEKNVVIMHPLPR-----VDEIDSEVDNIPQARYFKQSFYGV 286
            K +G +RL+     +H  + N VIMHPLPR      +E+D+++++ P    F+Q+  G+
Sbjct: 248 NKYRGKFRLNHNIYTQHC-KSNTVIMHPLPRDSREQANELDNDLNSHPNLAIFRQADNGL 306

Query: 287 PVRMAILKL 295
            +RMA+  L
Sbjct: 307 LIRMALFAL 315