Pairwise Alignments

Query, 302 a.a., aspartate carbamoyltransferase from Methanococcus maripaludis S2

Subject, 339 a.a., aspartate carbamoyltransferase (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  249 bits (636), Expect = 6e-71
 Identities = 135/309 (43%), Positives = 200/309 (64%), Gaps = 17/309 (5%)

Query: 3   HLISMRDIGREEILNILDESERMEAILNEKGHCDFLNGRILATLFYEPSTRTRLSFETAM 62
           H++S+  +  + I  I + + RM      +     L G IL  LF+EPSTRTR+SF  A 
Sbjct: 8   HILSVNQLDLDSIQTIFNVAHRMMPYALREKRTKVLEGAILGNLFFEPSTRTRVSFGCAF 67

Query: 63  KRLGGNVIGFTDISNTSVTKGESLADTIKVISGYSDLIAIRHPSEGAARLSSENSKVPVI 122
             LGG+V   T ++++S++KGESL DT +V+S YSD+IA+RHP   + +  +E S+VPVI
Sbjct: 68  NLLGGHVRETTGMASSSLSKGESLYDTARVLSTYSDVIAMRHPDSYSVKEFAEGSRVPVI 127

Query: 123 NAGDGSNQHPTQTLLDLYTIKREVGH----IENLKIAFIGDLKYGRTVHSLCQALSLFKG 178
           N GDGSN+HPTQ LLDL+TI++E+GH    I+ + IA +GDLK+GRTVHSL + L ++K 
Sbjct: 128 NGGDGSNEHPTQALLDLFTIQKELGHASRGIDGMHIAMVGDLKFGRTVHSLSRLLCMYKN 187

Query: 179 VEIKLISPDELKMPREVIEDIAG---KIKLSEMADVDIDDVDVVYMTRIQKERFVDVNEY 235
           +   LISP EL MP  VI DI      IK+++  +  +D  D++Y+TRIQ+ERF    E 
Sbjct: 188 ISFTLISPTELAMPDYVISDIENAGHSIKITDQLEGHLDKADILYLTRIQEERFPSQEEA 247

Query: 236 YKVKGIYRLSK----EHIGEKNVVIMHPLPR-----VDEIDSEVDNIPQARYFKQSFYGV 286
            K +G +RL++    +H  + N VIMHPLPR      +E+D+++++ P    F+Q+  G+
Sbjct: 248 NKYRGKFRLNRSIYTQHC-KSNTVIMHPLPRDSRAQANELDNDLNSHPNLAIFRQADNGL 306

Query: 287 PVRMAILKL 295
            +RMA+  L
Sbjct: 307 LIRMALFAL 315