Pairwise Alignments

Query, 1025 a.a., hypothetical protein from Methanococcus maripaludis S2

Subject, 1029 a.a., hypothetical protein from Methanococcus maripaludis JJ

 Score =  436 bits (1120), Expect = e-126
 Identities = 298/1043 (28%), Positives = 543/1043 (52%), Gaps = 51/1043 (4%)

Query: 1    MYRELSKEELLEKFDEYITSEDIKKRAESTKILGYLGINDIKSRMDNILSLTFENDISIR 60
            MY+   K +L   FD+YI S++ K + E+ KILG L    +  RM  I+ L  + +I++ 
Sbjct: 1    MYQSTDKNDLAALFDKYIESDNYKDKTEAAKILGLLDEQALDERMQKIVILNSDPNIAVL 60

Query: 61   LNLITAFSNILNKFPEVFSELIGCIYYNTEFSNNILSEHAKNEIKALGPEVIERHVEHFR 120
            LNL+++   IL K+P+   +L+  +Y NTEFSN+++ E ++  I ++ P+VI+  V H+ 
Sbjct: 61   LNLLSSIKVILLKYPKKAEKLLIHVYINTEFSNHLVKEFSRQIIDSINPKVIDNLVVHYN 120

Query: 121  NGIYSKNTEERLKSVILLSLISRFSPEYLDKALSEIVMASTYDSSALIQLLALGTLDDFS 180
            + +YSKN  E  +++++L  +S  SP YL  +L E+ M S Y  S L+++L+   LD+F 
Sbjct: 121  SKLYSKNNFEVARALLVLGFVSMHSPRYLKNSLPELSMISLYSRSELLRILSQAILDEFE 180

Query: 181  EINRNFLR-YSYLVFNKKMDITPLNKSKTGAEITKSLIRLTVSDEIDGNTINELLKYLSI 239
             I ++ ++   +L+ +   +   LN      ++ K L+ L + +EI  + +  +L+Y+  
Sbjct: 181  NIPKSIIKDLKFLIESPDANEDNLNAEN---DLLKKLVILNLKNEIKNDELLFILEYVDD 237

Query: 240  ENDFCTLLAAISLQ------NNILKVEKNFEDYPLIFQDQLSKFYKKHPNNVQQLISYSL 293
             +    LL+AI+L+       N+++  KN  D   +  D+L    +    N     SY  
Sbjct: 238  ADYRIALLSAITLKKHQKSLKNLIQ-SKNELDVHSLISDKLYGSDEITAINAMLAFSY-- 294

Query: 294  ILDITHSLNLEIKNVDFEKIFYYLKKNISGKDHISKAFSLIILY---LLHKMEKLNLDE- 349
               +T  +NLE   +D +K    ++  +  K++++    LI  Y   +L+    LN DE 
Sbjct: 295  ---LTIDMNLE---MDTKKCLKLIENPV--KEYLTHENYLISFYGFEMLNSFVLLNNDEL 346

Query: 350  --EIDEIFDNYPFENILKEHPLCYYFGMPLLAE--KYNTLPEVDKSPYLIRSLELKMQYM 405
               I+++ +N     + +++ L YY G  LL    +Y+ L   +K+ Y    L ++   +
Sbjct: 347  NLRIEKVLENNDLGKLFRKNNLNYYSGTRLLVNLGRYDLL-SPEKNMYFDEDLMIEYSEL 405

Query: 406  APTERHHYIKSAEKNIKSDYWLERYNGAKKIGSALYFDESKEFMDFELVKSIIHDEIYLV 465
                     K+ EK  K++ WL R+   KKIG+ LY   S+     +L+++I+ D +YLV
Sbjct: 406  PKNRAIEQFKNLEKEFKNEDWLYRFEIGKKIGNLLYAFPSEIDYKQDLIQTILADRVYLV 465

Query: 466  RNIGIWILRILVKYNIKLPERIILEVIHDLNSPYWELRFEYYLLLNELLEKRPELLTEFN 525
            R+IG WIL+I+++   K+P+++I+E I  L+ P  E+R +  +  N+L++K PE+L    
Sbjct: 466  RSIGAWILQIILERGFKIPKKLIIESIACLDDPNMEIRQDCAIFYNKLIKKYPEILKNSE 525

Query: 526  TASKIKSILGSHYVNENYPPFKIAIKSILDKILKNLE-------NTPKKFQDELSGELYS 578
             +SK++  L + Y  +++   +   +  L  I ++ E       N  +KF+         
Sbjct: 526  ISSKLQGALATKYFTDHFTIIRTICEDTLKMIPESKELIGYESKNLEEKFKT-------L 578

Query: 579  EQLFENPVTSAAFLEKLKINLDSYILKNDEKNILKVLTFLKTHESKVDCSYLLEELVKLK 638
            E+   +P  + + + +LK+ L SYI   D +NI+K+L F++  E   +   L  EL KLK
Sbjct: 579  EKALNHPELNKSVVIRLKVKLKSYIRSEDSENIVKILEFIEMQELTEEYFDLFHELFKLK 638

Query: 639  DNYPDANYFLNNIKNRYKLIPKPLEIRILNSLNNPIPEYKKDGLEEIITYLNEGFKINNG 698
             ++  A   LN +KN++  +PKP E  I  +LN  I   + + + EI  Y+ EG+KI+  
Sbjct: 639  KDFEIAGELLNRLKNKFSEVPKPREAIIYGNLNEMIISRRINAVNEIFEYILEGYKISER 698

Query: 699  IGLKIKEILVM-YRDEKLTDLCINILNLQNDIESKRLIFEKREFDTHLNDLKEIKEKSDE 757
            I  KIKE ++      K+T L + IL   +  ESK++  EK+E + ++  L+   E    
Sbjct: 699  ITRKIKEFVIYPQATPKITSLSLKILEKIDTEESKKIFEEKQELENYI--LENNFESEVV 756

Query: 758  NIKQMSTEELYVKLSSQL-HKTSEYDYQSINFNDILYFLSDYSKRPSVILTTMILKILKN 816
            +IK  + +E+Y  L   L H     +Y  + F D + F    S+R S+I+T ++L I K 
Sbjct: 757  DIKNQTWQEIYFSLKYLLTHDYKTLNYVDLEFFDFMKFSILNSERNSLIITIILLDIFKA 816

Query: 817  VITDPNSNILNSPDIDNPKVLENLYYLIYSTDYEILSKNAIILTVEIVKNKPEWLLRNIT 876
             +   ++N++         VL N++ +I++  Y +L+   +     I+  K  W   ++ 
Sbjct: 817  NLKSGDTNLMYELGKYKKSVLNNIFKIIFNEKYPLLAYKGLECLKVIITKKTSWFEESVL 876

Query: 877  NVSKNKNWPLFLNSLLDYPDNKVLGETINAFNYYAKNSNSFDLSAEFLEKLVNRL-DTSN 935
            N    + +   ++ LLD  + ++  E +       K +       E  +K++  + D   
Sbjct: 877  NAENFEEYLPLISKLLDENEPQIQVEALETLASMVKLNVKCTEHPEISKKVLELISDDKK 936

Query: 936  WENFKKIVKVL--GNYEMDEKMLNRFSKLLLEKIENSNDDSKLILLRFFKIQDISRLNSN 993
            W  FKK ++V+   N+E + +ML + SK ++E ++ SNDDSKL L++FFKI+ I ++   
Sbjct: 937  WIIFKKALEVIYSCNFEDNLEMLEKVSKQIIEYLKTSNDDSKLFLIKFFKIKGIDKIPDY 996

Query: 994  LVAQLLNLKNSKNYDIKRDIEEI 1016
            L  +L   + S N  +  +I E+
Sbjct: 997  LFDELKTFETSSNPYVSSEIAEL 1019