Pairwise Alignments

Query, 260 a.a., ABC transporter permease from Methanococcus maripaludis S2

Subject, 273 a.a., Binding-protein-dependent transport systems inner membrane component from Pseudomonas syringae pv. syringae B728a

 Score =  120 bits (300), Expect = 4e-32
 Identities = 77/255 (30%), Positives = 136/255 (53%), Gaps = 23/255 (9%)

Query: 13  LTFLFTFLLFLSISSLILVP-----------KFDDVLSSIFNPEMIYSLKVSL----YSS 57
           LT  +T L++LS+  ++L+P            +D   + I  P +I +LK+S     Y++
Sbjct: 14  LTLGYT-LVYLSL--IVLIPLAAMFVHAAQLTWDQFWTIITAPRVIAALKLSFGTAFYAA 70

Query: 58  LISTGIVLGFSIPTGYAISRYSFPGKSIVKAILDLPIAFPELVLGLALLLLFGQT-FIGD 116
           LI+   V+G  +   + + RY+FPG+ ++ A++DLP A P  V G+AL  L+    ++G 
Sbjct: 71  LING--VIGTLL--AWVLVRYTFPGRKVIDAMIDLPFALPTAVAGIALTALYAPNGWVGQ 126

Query: 117 ILEFFGIKVVFTKLGIVVAQIFTALPYAIRIVCSTFQDINPRYELVSRSLGYSEFETFKN 176
                G K+ +T LGI +A  F  LP+ +R V     DI    E  +  LG    + F++
Sbjct: 127 FAADLGFKIAYTPLGITLALTFVTLPFVVRTVQPVLADIPREVEEAAACLGARPLQVFRH 186

Query: 177 VTLPMARSGIFASSIIAFARCMGTFGTVLMLAGGTYMYTETLPITLYLNMSYGNLGMAIS 236
           + +P           +AFAR +G +G+V+ +AG   M TE LP+ + + +   +   A +
Sbjct: 187 ILVPALLPAWLTGFALAFARGVGEYGSVIFIAGNMPMKTEILPLLIMVKLDQYDYTGATA 246

Query: 237 SGIVLLMISFIAILI 251
            G+++L++SFI +L+
Sbjct: 247 IGVMMLVVSFILLLL 261