Pairwise Alignments

Query, 260 a.a., ABC transporter permease from Methanococcus maripaludis S2

Subject, 290 a.a., Binding-protein-dependent transport systems inner membrane component from Pseudomonas syringae pv. syringae B728a

 Score =  119 bits (298), Expect = 7e-32
 Identities = 73/239 (30%), Positives = 130/239 (54%), Gaps = 7/239 (2%)

Query: 19  FLLFLSISSLILVPK-----FDDVLSSIFNPEMIYSLKVSLYSSLISTGIVLGFSIPTGY 73
           F+LFL +   I+V +           +I  P+ + +LK+++ + LIS  + L F +   +
Sbjct: 34  FVLFLGLPLFIVVSQGLKNGLGAFFIAILEPDALSALKLTVIAVLISVPLNLVFGVSAAW 93

Query: 74  AISRYSFPGKSIVKAILDLPIAFPELVLGLALLLLFG-QTFIGDILEFFGIKVVFTKLGI 132
            +S+YSF GKSI+  ++DLP +   ++ GL  +L+FG Q   G  L+   I++VF   GI
Sbjct: 94  CVSKYSFRGKSILVTLIDLPFSVSPVIAGLVYVLMFGAQGLFGPWLQDHDIQIVFALPGI 153

Query: 133 VVAQIFTALPYAIRIVCSTFQDINPRYELVSRSLGYSEFETFKNVTLPMARSGIFASSII 192
           V+A IF  +P+  R +    Q+   + E  +R LG + ++ F +VT+P  + G+    ++
Sbjct: 154 VLATIFVTVPFVARELIPLMQEQGTQEEEAARLLGANGWQMFWHVTVPNIKWGLIYGVVL 213

Query: 193 AFARCMGTFGTVLMLAGGTYMYTETLPITL-YLNMSYGNLGMAISSGIVLLMISFIAIL 250
             AR MG FG V +++G     T TLP+ +  L   Y ++     + ++L++  FI +L
Sbjct: 214 CTARAMGEFGAVSVVSGHIRGVTNTLPLHVEILYNEYNHVAAFAVASLLLILALFILLL 272