Pairwise Alignments

Query, 260 a.a., ABC transporter permease from Methanococcus maripaludis S2

Subject, 225 a.a., molybdenum ABC transporter, permease protein (RefSeq) from Shewanella amazonensis SB2B

 Score = 96.3 bits (238), Expect = 5e-25
 Identities = 58/205 (28%), Positives = 113/205 (55%), Gaps = 2/205 (0%)

Query: 49  SLKVSLYSSLISTGIVLGFSIPTGYAISRYSFPGKSIVKAILDLPIAFPELVLGLALLLL 108
           SL +S   +L++  I+L   +  G A++ + F GKS+++A++ +P+  P  V+G  LL+ 
Sbjct: 5   SLWLSGKLALVTVLILLPLCVFAGRALAYHQFRGKSLIEALIMVPLVLPPTVVGYYLLVS 64

Query: 109 FG-QTFIGDILE-FFGIKVVFTKLGIVVAQIFTALPYAIRIVCSTFQDINPRYELVSRSL 166
           FG ++++G  L   FGI++VF   G+V+A I   +P+A++ +   F+ I       +   
Sbjct: 65  FGSESWLGQWLRNTFGIELVFHFSGLVLASILVNIPFALQPIQRAFEAIPVDVRDAAACC 124

Query: 167 GYSEFETFKNVTLPMARSGIFASSIIAFARCMGTFGTVLMLAGGTYMYTETLPITLYLNM 226
           G S+ +    + LPM   G+  + ++ F+  +G FG VLM+ G     T+T+ I +Y ++
Sbjct: 125 GMSKSKILTRIELPMIWPGLVTALVLTFSHVLGEFGVVLMMGGNISGETKTISIAIYDSV 184

Query: 227 SYGNLGMAISSGIVLLMISFIAILI 251
              +   A    ++LL+ +  A+ +
Sbjct: 185 QAFDFDAAGIMSLILLLFAISALAL 209