Pairwise Alignments

Query, 260 a.a., ABC transporter permease from Methanococcus maripaludis S2

Subject, 255 a.a., ABC transporter permease from Methanococcus maripaludis JJ

 Score =  136 bits (343), Expect = 4e-37
 Identities = 74/242 (30%), Positives = 136/242 (56%), Gaps = 4/242 (1%)

Query: 11  IFLTFLFTFLLFLSISSLILVPKFDDVLSSIFNPEMIYSLKVSLYSSLISTGIVLGFSIP 70
           +FL      LLF+ +  L ++    +V  +I + E+I SL VS+ ++  +T + +   IP
Sbjct: 10  LFLVISLFLLLFVLLPLLNMILNPGNVAGAIHDSEVIKSLLVSIKAASTATALAIFLGIP 69

Query: 71  TGYAISRYSFPGKSIVKAILDLPIAFPELVLGLALLLLFGQTFIGDILEFFGIKVVFTKL 130
             Y ++RY F GK++V+AI+D+P+A P  V+G+ +L  F  T IG  +E  G ++V    
Sbjct: 70  LSYLLARYHFTGKNVVEAIIDIPMAIPHSVIGIMILAFFYGTSIGRGIENIGFEIVDNFW 129

Query: 131 GIVVAQIFTALPYAIRIVCSTFQDINPRYELVSRSLGYSEFETFKNVTLPMARSGIFASS 190
           GIVV  ++  LPY +      F  +N   E VSR+LG S+ +TF N++LP+ ++ + + S
Sbjct: 130 GIVVVMLYVGLPYMVNSGRDGFLMVNEELENVSRTLGASKIKTFFNISLPLIKNNLVSGS 189

Query: 191 IIAFARCMGTFGTVLMLAGGTYMYTETLPITLYLNMSYGNLGMAISSGIVLLMISFIAIL 250
           I+ FAR +   G +L++A     + +T P+ +    +   L  +    ++++++S +   
Sbjct: 190 ILTFARGISEVGAILIVA----YFPKTTPVLILDRFNEYGLSSSKPISVIMIVLSIVLFS 245

Query: 251 IF 252
           +F
Sbjct: 246 VF 247