Pairwise Alignments

Query, 260 a.a., ABC transporter permease from Methanococcus maripaludis S2

Subject, 283 a.a., sulfate ABC transporter, permease protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 99.8 bits (247), Expect = 6e-26
 Identities = 69/256 (26%), Positives = 130/256 (50%), Gaps = 9/256 (3%)

Query: 4   ISFKKMSIFLTFLFTFLLFLSISSLILVPKFDDVLS----SIFNPEMIYSLKVSLYSSLI 59
           I +  + + L+FL  FL+     +++L   F+  ++    +I +P+ + +++++L   +I
Sbjct: 18  IKWSLIGLALSFLALFLVLPL--AVVLYGAFEAGINVWWQAITDPDALAAIRLTLLVLII 75

Query: 60  STGIVLGFSIPTGYAISRYSFPGKSIVKAILDLPIAFPELVLGLALLLLFG-QTFIGDIL 118
                  F +   +AI+++ F GK+++ +I+D+P A   +V+GL  ++LFG Q + G  L
Sbjct: 76  VVPTNAIFGVAIAWAIAKFEFRGKTLLISIIDMPFAISPVVVGLIFVILFGAQGWFGPWL 135

Query: 119 EFFGIKVVFTKLGIVVAQIFTALPYAIRIVCSTFQDINPRYELVSRSLGYSEFETFKNVT 178
               +KV+F   GI++  +F  LP+  R +    Q      E  S +LG +  +TF  VT
Sbjct: 136 AAHDLKVIFAVPGIIIVIMFGTLPFVARELIPLMQQQGKDEEEASLTLGANGLKTFWYVT 195

Query: 179 LPMARSGIFASSIIAFARCMGTFGTVLMLAGGTYMYTETLPITLYLNMSYGNLGMAISSG 238
           LP  + G+    I+  AR MG FG V +++G     T T+P  L++ + Y       +  
Sbjct: 196 LPNIKWGLLYGVILCNARAMGEFGAVAVVSGRIRGETNTMP--LHIEVLYNEYMFTAAFA 253

Query: 239 IVLLMISFIAILIFEK 254
           +  L+     + I  K
Sbjct: 254 VSSLLTGLALVTIVLK 269