Pairwise Alignments

Query, 260 a.a., ABC transporter permease from Methanococcus maripaludis S2

Subject, 226 a.a., molybdenum ABC transporter, permease protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 95.1 bits (235), Expect = 1e-24
 Identities = 58/205 (28%), Positives = 113/205 (55%), Gaps = 2/205 (0%)

Query: 49  SLKVSLYSSLISTGIVLGFSIPTGYAISRYSFPGKSIVKAILDLPIAFPELVLGLALLLL 108
           +L +S+  S I+  +++  SI  G A++   F GKS V+A++ +P+  P  V+G  LL+ 
Sbjct: 5   ALWLSVKLSSITVLVLVPLSILAGRALAYRQFIGKSWVEALIMVPLVLPPTVIGYYLLVG 64

Query: 109 FG-QTFIGDILE-FFGIKVVFTKLGIVVAQIFTALPYAIRIVCSTFQDINPRYELVSRSL 166
            G Q+++G  LE   G ++VF   G+V+A +   +P+A++ +   F+ +       +   
Sbjct: 65  LGSQSWLGQWLERLTGQQLVFHFSGLVLASVLVNIPFALQPIQRAFEAVPHDVRDAAACC 124

Query: 167 GYSEFETFKNVTLPMARSGIFASSIIAFARCMGTFGTVLMLAGGTYMYTETLPITLYLNM 226
           G S+ +    + LPM   G+  + ++ F+  +G FG VLM+ G     T+T+ I++Y ++
Sbjct: 125 GMSKLKILLKIELPMVWPGVLTAIVLCFSHVLGEFGVVLMMGGNIAGETKTISISIYDSV 184

Query: 227 SYGNLGMAISSGIVLLMISFIAILI 251
              + G A +  +VLL+ +  A+ +
Sbjct: 185 QAFDFGAAGTMSLVLLLFAITALAL 209