Pairwise Alignments

Query, 260 a.a., ABC transporter permease from Methanococcus maripaludis S2

Subject, 281 a.a., sulfate ABC transporter, permease protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  125 bits (313), Expect = 1e-33
 Identities = 73/253 (28%), Positives = 135/253 (53%), Gaps = 5/253 (1%)

Query: 9   MSIFLTFLF-TFLLFLSISSLILVPK---FDDVLSSIFNPEMIYSLKVSLYSSLISTGIV 64
           +S+ ++ LF + +L L  + LI+      + +    I +P ++ S KV++ S+L ++   
Sbjct: 19  ISLGVSLLFVSLILLLPTTGLIMQTSQMSWSEYWGVIADPRVLASYKVTILSALAASIFN 78

Query: 65  LGFSIPTGYAISRYSFPGKSIVKAILDLPIAFPELVLGLALLLLFGQTF-IGDILEFFGI 123
             F +   + + RY FPGK I+ A++DLP A P  V G+ L  L+ +   IG +L   GI
Sbjct: 79  CLFGLLLAWVLVRYEFPGKRILDALVDLPFALPTAVAGITLATLYAENGQIGSLLAELGI 138

Query: 124 KVVFTKLGIVVAQIFTALPYAIRIVCSTFQDINPRYELVSRSLGYSEFETFKNVTLPMAR 183
           KV +T LGIVVA IFT++P+ +R V    ++++   E    +LG ++   F  V LP   
Sbjct: 139 KVAYTPLGIVVAMIFTSIPFVVRTVQPVLEELSHEEEEAGMTLGATDAAVFWRVILPSLW 198

Query: 184 SGIFASSIIAFARCMGTFGTVLMLAGGTYMYTETLPITLYLNMSYGNLGMAISSGIVLLM 243
             +   + ++F R +G FG V+ +AG     +E   + +++ +   +   A +   ++LM
Sbjct: 199 PALMVGTALSFTRSLGEFGAVIFIAGNMPYISEITSLMIFVRLQEFDFAGASAIASIVLM 258

Query: 244 ISFIAILIFEKYE 256
            S + +L+   ++
Sbjct: 259 TSLLLLLLINLWQ 271