Pairwise Alignments

Query, 407 a.a., proteasome-activating nucleotidase from Methanococcus maripaludis S2

Subject, 639 a.a., ATP-dependent metalloprotease FtsH from Pseudomonas stutzeri RCH2

 Score =  223 bits (568), Expect = 1e-62
 Identities = 119/263 (45%), Positives = 169/263 (64%), Gaps = 2/263 (0%)

Query: 140 EEKPDISFEDIGGLNNQIRDIKEVVELPLKNPELFEKVGIVPPKGVLLYGPPGTGKTLLA 199
           E++   +F D+ G +    ++ E+VE  L++P  F+++G   P+GVL+ GPPGTGKTLLA
Sbjct: 149 EDQVKTTFADVAGCDEAKEEVHELVEF-LRDPGKFQRLGGRIPRGVLMVGPPGTGKTLLA 207

Query: 200 KAVAYETNASFVRVVGSELVKKFIGEGAKLVRDVFKLAKEKSPCIIFIDEIDAVASKRTE 259
           KA+A E    F  + GS+ V+ F+G GA  VRD+F+ AK+ +PCIIFIDEIDAV   R  
Sbjct: 208 KAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKHAPCIIFIDEIDAVGRHRGA 267

Query: 260 SLTGGDREVQRTLMQLLAEMDGFDSRGDVKIIAATNRPDILDPAILRPGRFDRIIEISMP 319
            L GG  E ++TL QLL EMDGF+    + +IAATNRPD+LDPA+LRPGRFDR + + +P
Sbjct: 268 GLGGGHDEREQTLNQLLVEMDGFEMNDGIIVIAATNRPDVLDPALLRPGRFDRQVVVGLP 327

Query: 320 DEDGRLEILKIHTEKMNL-KGVDLREVAKIAENMVGADLKAVCTEAGMFAIREEREFIKM 378
           D  GR +ILK+H  K+ + + V+   +A+      GADL  +  EA +FA R  +  ++M
Sbjct: 328 DIRGREQILKVHMRKVPISENVEPAVIARGTPGFSGADLANLVNEASLFAARSNKRIVEM 387

Query: 379 DDFREAISKITGKKEKCSYDMPQ 401
            +F  A  KI    E+ S  M +
Sbjct: 388 REFELAKDKIMMGAERKSMVMSE 410