Pairwise Alignments

Query, 407 a.a., proteasome-activating nucleotidase from Methanococcus maripaludis S2

Subject, 615 a.a., ATP-dependent metalloprotease FtsH from Pseudomonas stutzeri RCH2

 Score =  221 bits (564), Expect = 4e-62
 Identities = 118/258 (45%), Positives = 168/258 (65%), Gaps = 3/258 (1%)

Query: 139 IEEKPDISFEDIGGLNNQIRDIKEVVELPLKNPELFEKVGIVPPKGVLLYGPPGTGKTLL 198
           +E    +SF D+ G++    ++KE++E  L++P+ + ++G   PKGVLL GPPGTGKTLL
Sbjct: 148 VETDMKVSFADVAGVDEAKDELKEIIEF-LRDPQTYGRLGGRMPKGVLLVGPPGTGKTLL 206

Query: 199 AKAVAYETNASFVRVVGSELVKKFIGEGAKLVRDVFKLAKEKSPCIIFIDEIDAVASKR- 257
           A+AVA E    F  + GSE V+ F+G GA  VRD+F+ A+ ++P IIFIDE+DA+   R 
Sbjct: 207 ARAVAGEAKVPFFSISGSEFVEMFVGVGAARVRDLFEQARAQAPAIIFIDELDALGRARG 266

Query: 258 TESLTGGDREVQRTLMQLLAEMDGFDSRGDVKIIAATNRPDILDPAILRPGRFDRIIEIS 317
              L+GG  E ++TL QLL EMDGFD+   + ++AATNRP+ILDPA+LR GRFDR + + 
Sbjct: 267 AGPLSGGHDEKEQTLNQLLVEMDGFDTSSGLVLLAATNRPEILDPALLRAGRFDRQVLVD 326

Query: 318 MPDEDGRLEILKIHTEKMNL-KGVDLREVAKIAENMVGADLKAVCTEAGMFAIREEREFI 376
            PD+ GR++IL +H +K  L   VD + +A +     GADL  +  EA + A R   E +
Sbjct: 327 RPDKVGRVQILNVHLKKSRLGTDVDPQAIAALTPGFTGADLANLVNEATLLATRRNAEAV 386

Query: 377 KMDDFREAISKITGKKEK 394
            M+DF  AI +I    EK
Sbjct: 387 AMEDFTAAIERIIAGLEK 404