Pairwise Alignments

Query, 407 a.a., proteasome-activating nucleotidase from Methanococcus maripaludis S2

Subject, 616 a.a., ATP-dependent zinc metalloprotease FtsH3 from Synechocystis sp000284455 PCC 6803

 Score =  229 bits (584), Expect = 2e-64
 Identities = 121/259 (46%), Positives = 165/259 (63%), Gaps = 2/259 (0%)

Query: 137 MEIEEKPDISFEDIGGLNNQIRDIKEVVELPLKNPELFEKVGIVPPKGVLLYGPPGTGKT 196
           +++E +  ++F D+ G+     ++ EVV+  LKN + F ++G   PKGVLL GPPGTGKT
Sbjct: 150 VQMEPQTQVTFGDVAGIEQAKLELTEVVDF-LKNADRFTELGAKIPKGVLLVGPPGTGKT 208

Query: 197 LLAKAVAYETNASFVRVVGSELVKKFIGEGAKLVRDVFKLAKEKSPCIIFIDEIDAVASK 256
           LLAKAVA E    F  + GSE V+ F+G GA  VRD+F+ AK  +PCI+FIDEIDAV  +
Sbjct: 209 LLAKAVAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFEQAKANAPCIVFIDEIDAVGRQ 268

Query: 257 RTESLTGGDREVQRTLMQLLAEMDGFDSRGDVKIIAATNRPDILDPAILRPGRFDRIIEI 316
           R   L GG+ E ++TL QLL EMDGF+    + I+AATNRPD+LD A++RPGRFDR + +
Sbjct: 269 RGAGLGGGNDEREQTLNQLLTEMDGFEGNTGIIIVAATNRPDVLDSALMRPGRFDRQVVV 328

Query: 317 SMPDEDGRLEILKIHTEKMNL-KGVDLREVAKIAENMVGADLKAVCTEAGMFAIREEREF 375
             PD  GR EIL +H     L + VDL ++A+      GADL  +  EA + A R     
Sbjct: 329 DRPDYAGRREILNVHARGKTLSQDVDLDKIARRTPGFTGADLSNLLNEAAILAARRNLTE 388

Query: 376 IKMDDFREAISKITGKKEK 394
           I MD+  +AI ++    EK
Sbjct: 389 ISMDEVNDAIDRVLAGPEK 407