Pairwise Alignments

Query, 407 a.a., proteasome-activating nucleotidase from Methanococcus maripaludis S2

Subject, 623 a.a., FtsH-2 peptidase. Metallo peptidase. MEROPS family M41 from Synechococcus elongatus PCC 7942

 Score =  216 bits (550), Expect = 2e-60
 Identities = 120/254 (47%), Positives = 160/254 (62%), Gaps = 4/254 (1%)

Query: 146 SFEDIGGLNNQIRDIKEVVELPLKNPELFEKVGIVPPKGVLLYGPPGTGKTLLAKAVAYE 205
           +F D+ G+     +++E+V+  LK PE +  +G   PKGVLL GPPGTGKTLLAKAVA E
Sbjct: 167 TFSDVAGVEEAKAELQEIVDF-LKTPERYLNIGARIPKGVLLVGPPGTGKTLLAKAVAGE 225

Query: 206 TNASFVRVVGSELVKKFIGEGAKLVRDVFKLAKEKSPCIIFIDEIDAVASKRTE-SLTGG 264
               F  + GSE V+ F+G GA  VRD+F+ AK+K+PCI+FIDE+DA+   R   +  GG
Sbjct: 226 ARVPFFSISGSEFVELFVGAGAARVRDLFEQAKQKAPCIVFIDELDAIGKSRASGNFMGG 285

Query: 265 DREVQRTLMQLLAEMDGFDSRG-DVKIIAATNRPDILDPAILRPGRFDRIIEISMPDEDG 323
           + E ++TL QLL EMDGF + G  V ++AATNRP+ LDPA+LRPGRFDR + +  PD  G
Sbjct: 286 NDEREQTLNQLLTEMDGFSADGATVIVLAATNRPETLDPALLRPGRFDRQVLVDRPDLAG 345

Query: 324 RLEILKIHTEKMNL-KGVDLREVAKIAENMVGADLKAVCTEAGMFAIREEREFIKMDDFR 382
           R  IL I+  K+ L   VDL+ +A       GADL  +  EA + A R  R  +   D  
Sbjct: 346 RKAILDIYGRKVKLDPEVDLQAIAVRTSGFAGADLANLINEAALLAARNGRTEVAQADLN 405

Query: 383 EAISKITGKKEKCS 396
           EAI ++    EK S
Sbjct: 406 EAIERVVAGLEKKS 419