Pairwise Alignments

Query, 407 a.a., proteasome-activating nucleotidase from Methanococcus maripaludis S2

Subject, 632 a.a., FtsH peptidase homologue, chloroplast. Metallo peptidase. MEROPS family M41 from Synechococcus elongatus PCC 7942

 Score =  224 bits (570), Expect = 7e-63
 Identities = 118/253 (46%), Positives = 161/253 (63%), Gaps = 2/253 (0%)

Query: 138 EIEEKPDISFEDIGGLNNQIRDIKEVVELPLKNPELFEKVGIVPPKGVLLYGPPGTGKTL 197
           ++E K  + FED+ G+     +++EVV   L++ + F  VG   P+GVLL GPPGTGKTL
Sbjct: 158 QMEAKTGVMFEDVAGIEEAKEELQEVVSF-LRSSDRFTAVGARIPRGVLLVGPPGTGKTL 216

Query: 198 LAKAVAYETNASFVRVVGSELVKKFIGEGAKLVRDVFKLAKEKSPCIIFIDEIDAVASKR 257
           LAKA+A E    F  + GSE V+ F+G GA  VRD+F+ AKE SPCI+FIDEIDAV  +R
Sbjct: 217 LAKAIAGEAGVPFFSMSGSEFVEMFVGVGASRVRDLFRKAKENSPCIVFIDEIDAVGRQR 276

Query: 258 TESLTGGDREVQRTLMQLLAEMDGFDSRGDVKIIAATNRPDILDPAILRPGRFDRIIEIS 317
              + GG+ E ++TL QLL EMDGF+    V IIAATNRPD+LD A+LRPGRFDR I + 
Sbjct: 277 GAGIGGGNDEREQTLNQLLTEMDGFEENSGVIIIAATNRPDVLDSALLRPGRFDRQITVD 336

Query: 318 MPDEDGRLEILKIHTEKMNL-KGVDLREVAKIAENMVGADLKAVCTEAGMFAIREEREFI 376
           +P  +GRL IL++H     L + V L  +A+      GA+L  +  EA +   R  +  +
Sbjct: 337 LPSYNGRLGILQVHARNKKLAEEVSLEAIARRTPGFSGAELANLLNEAAILTARRNKTAV 396

Query: 377 KMDDFREAISKIT 389
              D  +AI ++T
Sbjct: 397 DETDIDDAIDRVT 409