Pairwise Alignments

Query, 407 a.a., proteasome-activating nucleotidase from Methanococcus maripaludis S2

Subject, 502 a.a., ATPase from Synechococcus elongatus PCC 7942

 Score =  109 bits (272), Expect = 2e-28
 Identities = 89/320 (27%), Positives = 152/320 (47%), Gaps = 20/320 (6%)

Query: 72  LGTILDKVNERKAVVK-SSTGPNFLVNLSQFV---DPEDIVPGARVCLNQQTLAIVEVLP 127
           LG++LD+  +R+++ + S +G   L+  +  +   + E +   A+V   + T A V+V+ 
Sbjct: 146 LGSVLDRELDRRSLPRPSESGREKLLKATLGLTRDEAEKVYRKAQVTTGRLTEAEVDVIL 205

Query: 128 KEKDYRAMAMEIEE--KPDISFEDIGGLNNQIRDIKEVVELPLKNPELFEKV---GIVPP 182
            EK        I E  + D + + +GGL      +++      ++    EK    G+  P
Sbjct: 206 SEKQQLIRRNGILEFIEEDETLDAVGGLEELKHWLRQ------RSGAFSEKARSYGLPQP 259

Query: 183 KGVLLYGPPGTGKTLLAKAVAYETNASFVRV-VGSELVKKFIGEGAKLVRDVFKLAKEKS 241
           KG+L+ G PG GK+L+AK  +       +R+ +G       +G     +R+  K A+  +
Sbjct: 260 KGMLILGVPGCGKSLIAKTTSRLWGLPLLRLDIGRVYDGSTVGRSEANLRNALKTAESIA 319

Query: 242 PCIIFIDEIDAVASKRTESLTGGDREVQRTLMQLLAEMDGFDSRGDVKIIAATNRPDILD 301
           P I+FIDE+D   +    S         R     L  M   + R  V ++A  NR + L 
Sbjct: 320 PAILFIDELDKAFAGSAGSADSDGGTSSRIFGSFLTWMQ--EKRSPVFVMATANRVERLP 377

Query: 302 PAILRPGRFDRIIEISMPDEDGRLEILKIHTEKMN--LKGVDLREVAKIAENMVGADLKA 359
              LR GRFD I  + +P  + R EI +IH  K    L   DL ++AK+++   GA+++ 
Sbjct: 378 GEFLRKGRFDEIFFVDLPTPEERAEIFRIHLAKRKRPLDRFDLEQLAKVSDGFSGAEIEQ 437

Query: 360 VCTEAGMFAIREEREFIKMD 379
               A   A  +EREF ++D
Sbjct: 438 ALIAAMYEAFAQEREFTQLD 457