Pairwise Alignments

Query, 407 a.a., proteasome-activating nucleotidase from Methanococcus maripaludis S2

Subject, 490 a.a., AAA family ATPase (RefSeq) from Shewanella amazonensis SB2B

 Score =  115 bits (288), Expect = 3e-30
 Identities = 79/244 (32%), Positives = 131/244 (53%), Gaps = 15/244 (6%)

Query: 146 SFEDIGGLNNQIRDIKEVVELPLKNPELFEKVGIVPPKGVLLYGPPGTGKTLLAKAVAYE 205
           SF DI GL+N    +KE   L  + PEL  +    PPKG+LL G  G+GK+L AKAVA  
Sbjct: 231 SFSDIAGLHN----LKEW--LKARAPELSPQSSAPPPKGILLLGVQGSGKSLAAKAVAGA 284

Query: 206 TNASFVRVVGSELVKKFIGEGAKLVRDVFKLAKEKSPCIIFIDEIDAVASKRTESLTGGD 265
                +R+  + L  K+IGE  K +R   +LA   SPC++++DEI+   S  + S  G  
Sbjct: 285 WQRPLLRLDMAALYNKYIGETEKNLRQALELADLMSPCVLWVDEIEKGIS-GSSSDEGTS 343

Query: 266 REVQRTLMQLLAEMDGFDSRGDVKIIAATNRPDILDPAILRPGRFDRIIEISMPDEDGRL 325
           + +  TL+  +AE      + DV ++A  N    L P ++R GR D I  + +PDE+ R 
Sbjct: 344 QRILGTLLTWMAE-----RKSDVFLVATANDIQALPPELMRKGRMDEIFFVDLPDEEIRK 398

Query: 326 EILKIHTEK--MNLKGVDLREVAKIAENMVGADLKAVCTEAGMFAIREEREFIKMDDFRE 383
            I  IH +K  +++  +DL  +++ ++   GA+++     A +++    R+ ++     E
Sbjct: 399 AIFLIHCKKRGVDVTSMDLGLLSRASQGFSGAEIEQAVISA-IYSAASRRQPVEQAIILE 457

Query: 384 AISK 387
            +S+
Sbjct: 458 ELSR 461