Pairwise Alignments

Query, 407 a.a., proteasome-activating nucleotidase from Methanococcus maripaludis S2

Subject, 640 a.a., Peptidase M41, FtsH (NCBI) from Rhodospirillum rubrum S1H

 Score =  233 bits (593), Expect = 2e-65
 Identities = 123/263 (46%), Positives = 175/263 (66%), Gaps = 2/263 (0%)

Query: 140 EEKPDISFEDIGGLNNQIRDIKEVVELPLKNPELFEKVGIVPPKGVLLYGPPGTGKTLLA 199
           E+   ++F+D+ G++   ++++EVVE  L++P+ F+++G   PKGVLL GPPGTGKTLLA
Sbjct: 147 EKTGRVTFDDVAGIDEAKQELEEVVEF-LRDPQKFQRLGGKIPKGVLLVGPPGTGKTLLA 205

Query: 200 KAVAYETNASFVRVVGSELVKKFIGEGAKLVRDVFKLAKEKSPCIIFIDEIDAVASKRTE 259
           +A+A E N  F  + GS+ V+ F+G GA  VRD+F+  K+ +PC+IFIDEIDAV   R  
Sbjct: 206 RAIAGEANVPFFTISGSDFVEMFVGVGASRVRDMFEQGKKNAPCLIFIDEIDAVGRHRGA 265

Query: 260 SLTGGDREVQRTLMQLLAEMDGFDSRGDVKIIAATNRPDILDPAILRPGRFDRIIEISMP 319
            L GG+ E ++TL QLL EMDGF++   V +IAATNRPD+LDPA+LRPGRFDR + +S P
Sbjct: 266 GLGGGNDEREQTLNQLLVEMDGFEANEGVILIAATNRPDVLDPALLRPGRFDRQVTVSNP 325

Query: 320 DEDGRLEILKIHTEKMNL-KGVDLREVAKIAENMVGADLKAVCTEAGMFAIREEREFIKM 378
           D  GR +ILK+H  K  L   VD + +A+      GADL  +  EA + A R+ +  + M
Sbjct: 326 DIMGREKILKVHMRKTPLGPDVDAKVIARGTPGFSGADLSNLVNEAALLAARKGKRVVTM 385

Query: 379 DDFREAISKITGKKEKCSYDMPQ 401
            +F EA  K+    E+ S  M +
Sbjct: 386 AEFEEAKDKVLMGAERRSMVMTE 408