Pairwise Alignments

Query, 407 a.a., proteasome-activating nucleotidase from Methanococcus maripaludis S2

Subject, 329 a.a., ATPase central domain-containing protein (RefSeq) from Shewanella loihica PV-4

 Score = 88.6 bits (218), Expect = 2e-22
 Identities = 68/237 (28%), Positives = 113/237 (47%), Gaps = 11/237 (4%)

Query: 153 LNNQIRDIKEVVELPLKNPELFEKVGIVPPKGVLLYGPPGTGKTLLAKAVAYETNASFVR 212
           L++ I++  E V L  +  +   + G+ P + +L  G PGTGKT+ A  +A E       
Sbjct: 95  LSDDIQERMEKVILEQRQKDKLSQFGLQPRRKLLFTGSPGTGKTMSASMLATELKLPLYT 154

Query: 213 VVGSELVKKFIGEGAKLVRDVFKLAKEKSPCIIFIDEIDAVASKRTESLTGGDREVQRTL 272
           +V   L+ +F+GE A  +R +F   ++     +F DE DA+ ++R      G  E++R L
Sbjct: 155 IVLDNLITRFMGETAAKLRLIFDHIRQTRAVYLF-DEFDAIGTQRGAPNDVG--EIRRVL 211

Query: 273 --MQLLAEMDGFDSRGDVKIIAATNRPDILDPAILRPGRFDRIIEISMPDEDGRLEILKI 330
               L  E D  +S     I+AATN P++LD A+ R  RFD II+   P  D    +++ 
Sbjct: 212 NSFLLFVEQDASES----IIVAATNHPELLDQALYR--RFDDIIKFEKPKFDQICLLIQN 265

Query: 331 HTEKMNLKGVDLREVAKIAENMVGADLKAVCTEAGMFAIREEREFIKMDDFREAISK 387
                +    D   VA+ A  +  A++   C +A   A+      I  +   +A S+
Sbjct: 266 RLSLFDTDDFDWGMVAEAANGLSSAEITRSCEDAAKEAVLNFNAKITSETLLKAFSR 322