Pairwise Alignments

Query, 407 a.a., proteasome-activating nucleotidase from Methanococcus maripaludis S2

Subject, 489 a.a., ATPase central domain-containing protein (RefSeq) from Shewanella loihica PV-4

 Score = 97.8 bits (242), Expect = 6e-25
 Identities = 67/220 (30%), Positives = 112/220 (50%), Gaps = 14/220 (6%)

Query: 147 FEDIGGLNNQIRDIKEVVELPLKNPELFEKVGIVPPKGVLLYGPPGTGKTLLAKAVAYET 206
           F  + GL+N  + + +      ++P    +  +  PKG+LL G  G+GK+L AKAVA   
Sbjct: 232 FSQVAGLHNLKKWLSQ------RSPASSAEGRVDHPKGILLLGVQGSGKSLAAKAVAGMW 285

Query: 207 NASFVRVVGSELVKKFIGEGAKLVRDVFKLAKEKSPCIIFIDEIDAVASKRTESLTGGDR 266
               +R+  S L  K+IGE  K +R+   LA   +PC+++IDEI+    K   S +  D 
Sbjct: 286 QRPLLRLDMSALYNKYIGETEKNLRNALALADLMAPCVLWIDEIE----KGLSSGSSDDG 341

Query: 267 EVQRTLMQLLAEMDGFDSRGDVKIIAATNRPDILDPAILRPGRFDRIIEISMPDEDGRLE 326
             +R L  LL  M   + + +V ++A  N    L P ++R GR D I  + +PD+  R  
Sbjct: 342 TSKRILGALLTWM--AERKSEVFLVATANDISALPPELMRKGRMDEIFFVDLPDDSVRQA 399

Query: 327 ILKIHTEKMNLK--GVDLREVAKIAENMVGADLKAVCTEA 364
           I  IH ++  L     DL ++++ ++   GA+++     A
Sbjct: 400 IFLIHLQRRQLDPLNFDLAKLSQASQGFSGAEIEQAIISA 439