Pairwise Alignments

Query, 407 a.a., proteasome-activating nucleotidase from Methanococcus maripaludis S2

Subject, 609 a.a., Mycobacterial proteasome ATPase Mpa from Mycobacterium tuberculosis H37Rv

 Score =  173 bits (439), Expect = 1e-47
 Identities = 109/296 (36%), Positives = 170/296 (57%), Gaps = 29/296 (9%)

Query: 104 PEDIVPGARVCLNQQTLAIVEVLPKEKDYRAMAMEIEEKPDISFEDIGGLNNQIRDIKEV 163
           P  + PG  + ++ +     E +PK +      + +EE PD+S+ DIGGL+ QI  I++ 
Sbjct: 211 PRKLRPGDSLLVDTKAGYAFERIPKAE---VEDLVLEEVPDVSYADIGGLSRQIEQIRDA 267

Query: 164 VELPLKNPELFEKVGIVPPKGVLLYGPPGTGKTLLAKAV---------------AYETNA 208
           VELP  + EL+ +  + PPKGVLLYGPPG GKTL+AKAV               A+E  +
Sbjct: 268 VELPFLHKELYREYSLRPPKGVLLYGPPGCGKTLIAKAVANSLAKKMAEVRGDDAHEAKS 327

Query: 209 SFVRVVGSELVKKFIGEGAKLVRDVFKLAKEK----SPCIIFIDEIDAVASKRTESLTGG 264
            F+ + G EL+ KF+GE  + +R +F+ A+EK    +P I+F DE+D++   R    TG 
Sbjct: 328 YFLNIKGPELLNKFVGETERHIRLIFQRAREKASEGTPVIVFFDEMDSIFRTRG---TGV 384

Query: 265 DREVQRTLM-QLLAEMDGFDSRGDVKIIAATNRPDILDPAILRPGRFDRIIEISMPDEDG 323
             +V+ T++ QLL+E+DG +   +V +I A+NR D++DPAILRPGR D  I+I  PD + 
Sbjct: 385 SSDVETTVVPQLLSEIDGVEGLENVIVIGASNREDMIDPAILRPGRLDVKIKIERPDAEA 444

Query: 324 RLEIL-KIHTEKMNLKGVDLREVAKIAENMVGADLKAVCTEAGMFAIREEREFIKM 378
             +I  K  TE + +   DL E        + A ++ V     M+A  ++  F+++
Sbjct: 445 AQDIYSKYLTEFLPVHADDLAEFDGDRSACIKAMIEKVVDR--MYAEIDDNRFLEV 498



 Score = 31.2 bits (69), Expect = 9e-05
 Identities = 24/98 (24%), Positives = 47/98 (47%), Gaps = 2/98 (2%)

Query: 27  IAELESKVLRLELKNKDINRENVQIKKENEILKRELDKLRIPPLILGTILDKVNERKAVV 86
           I +LE+++  L  +N  +     + +++   L+ E+D+L  PP   G +L   ++   V 
Sbjct: 56  IHQLEARIDSLAARNSKLMETLKEARQQLLALREEVDRLGQPPSGYGVLL-ATHDDDTVD 114

Query: 87  KSSTGPNFLVNLSQFVDPEDIVPGARVCLNQQTLAIVE 124
             ++G    +  S  +D   +  G  V LN + L +VE
Sbjct: 115 VFTSGRKMRLTCSPNIDAASLKKGQTVRLN-EALTVVE 151