Pairwise Alignments

Query, 407 a.a., proteasome-activating nucleotidase from Methanococcus maripaludis S2

Subject, 656 a.a., cell division protein FtsH (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  229 bits (584), Expect = 2e-64
 Identities = 125/261 (47%), Positives = 167/261 (63%), Gaps = 2/261 (0%)

Query: 137 MEIEEKPDISFEDIGGLNNQIRDIKEVVELPLKNPELFEKVGIVPPKGVLLYGPPGTGKT 196
           M  +E   ++FED+ G++    ++ EVVE  L NP  F ++G   PKGVLL GPPGTGKT
Sbjct: 142 MITQESARVTFEDVAGVDEAKEELSEVVEF-LSNPRKFTRLGGRIPKGVLLVGPPGTGKT 200

Query: 197 LLAKAVAYETNASFVRVVGSELVKKFIGEGAKLVRDVFKLAKEKSPCIIFIDEIDAVASK 256
           LLA+AVA E    F  + GS+ V+ F+G GA  VRD+F   K+ +PC+IFIDEIDAV  +
Sbjct: 201 LLARAVAGEAGVPFFSISGSDFVEMFVGVGASRVRDLFMQGKKNAPCLIFIDEIDAVGRQ 260

Query: 257 RTESLTGGDREVQRTLMQLLAEMDGFDSRGDVKIIAATNRPDILDPAILRPGRFDRIIEI 316
           R   L GG  E ++TL QLL EMDGF+S   V +IAATNRPD+LDPA+LRPGRFDR + +
Sbjct: 261 RGAGLGGGHDEREQTLNQLLVEMDGFESNEGVILIAATNRPDVLDPALLRPGRFDRQVVV 320

Query: 317 SMPDEDGRLEILKIHTEKMNL-KGVDLREVAKIAENMVGADLKAVCTEAGMFAIREEREF 375
             PD  GR  IL++H  +  L  GV+L  +AK      GADL+ +  EA + A +  ++ 
Sbjct: 321 PTPDVRGRKRILEVHGRRTPLSSGVNLEIIAKGTPGFSGADLENLVNEAALQAAKLNKDV 380

Query: 376 IKMDDFREAISKITGKKEKCS 396
           + M DF  A  K+   KE+ S
Sbjct: 381 VDMGDFEYAKDKVLMGKERRS 401