Pairwise Alignments

Query, 407 a.a., proteasome-activating nucleotidase from Methanococcus maripaludis S2

Subject, 638 a.a., ATP-dependent metalloprotease FtsH (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  234 bits (598), Expect = 4e-66
 Identities = 123/263 (46%), Positives = 173/263 (65%), Gaps = 2/263 (0%)

Query: 140 EEKPDISFEDIGGLNNQIRDIKEVVELPLKNPELFEKVGIVPPKGVLLYGPPGTGKTLLA 199
           E++  ++F+D+ G++    D++E+VE  L+NP+ F ++G   PKG LL GPPGTGKTLLA
Sbjct: 146 EKQGRVTFDDVAGIDEAKDDLEEIVEF-LRNPQKFSRLGGKIPKGALLVGPPGTGKTLLA 204

Query: 200 KAVAYETNASFVRVVGSELVKKFIGEGAKLVRDVFKLAKEKSPCIIFIDEIDAVASKRTE 259
           +AVA E    F  + GS+ V+ F+G GA  VRD+F+ AK+ +PCI+FIDEIDAV   R  
Sbjct: 205 RAVAGEAGVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKNAPCIVFIDEIDAVGRSRGV 264

Query: 260 SLTGGDREVQRTLMQLLAEMDGFDSRGDVKIIAATNRPDILDPAILRPGRFDRIIEISMP 319
              GG+ E ++TL QLL EMDGF++   + I+AATNRPD+LDPA+LRPGRFDR +++  P
Sbjct: 265 GYGGGNDEREQTLNQLLVEMDGFEANEGIIIVAATNRPDVLDPALLRPGRFDRQVQVPNP 324

Query: 320 DEDGRLEILKIHTEKMNL-KGVDLREVAKIAENMVGADLKAVCTEAGMFAIREEREFIKM 378
           D  GR +IL +H  K+ L   VDLR +A+      GADL  +  E+ + A R  R F+ M
Sbjct: 325 DIKGREKILGVHARKVPLGPDVDLRIIARGTPGFSGADLANLVNESALMAARVGRRFVTM 384

Query: 379 DDFREAISKITGKKEKCSYDMPQ 401
           +DF  A  K+    E+ S  M +
Sbjct: 385 EDFESAKDKVMMGAERRSMVMTE 407