Pairwise Alignments

Query, 407 a.a., proteasome-activating nucleotidase from Methanococcus maripaludis S2

Subject, 519 a.a., ATPase central domain-containing protein (RefSeq) from Shewanella sp. ANA-3

 Score =  108 bits (270), Expect = 4e-28
 Identities = 77/245 (31%), Positives = 127/245 (51%), Gaps = 13/245 (5%)

Query: 147 FEDIGGLNNQIRDIKEVVELPLKNPELFEKVGIVP--PKGVLLYGPPGTGKTLLAKAVAY 204
           F  I GL+N  + +K+    P       +K  + P  PKGVLL G  G+GK+L AKAVA 
Sbjct: 256 FSQIAGLHNLKKWLKQ--RAPATQATTDDKATVQPDAPKGVLLLGVQGSGKSLAAKAVAG 313

Query: 205 ETNASFVRVVGSELVKKFIGEGAKLVRDVFKLAKEKSPCIIFIDEIDAVASKRTESLTGG 264
                 +R+    L  K+IGE  K +R+  +LA   SPCI++IDEI+   S  + S  G 
Sbjct: 314 VWQRPLLRLDMGALYNKYIGETEKNLRNALELADMMSPCILWIDEIEKGLS-GSSSDEGT 372

Query: 265 DREVQRTLMQLLAEMDGFDSRGDVKIIAATNRPDILDPAILRPGRFDRIIEISMPDEDGR 324
              +  TL+  +AE      + +V ++A  N   +L P ++R GR D I  + +PDE  R
Sbjct: 373 STRILGTLLTWMAE-----RKSEVFVVATANDIQVLPPELMRKGRMDEIFFVDLPDEAIR 427

Query: 325 LEILKIHTEK--MNLKGVDLREVAKIAENMVGADLKAVCTEAGMFAIREEREFIKMDDFR 382
             I  IH ++  +++  +DL ++++ ++   GA+++     A M++ R     +  D   
Sbjct: 428 QAIFLIHCQRRGIDVTRLDLAQLSRHSQGFSGAEIEQAVI-AAMYSARSLARSLDQDMLL 486

Query: 383 EAISK 387
           E ++K
Sbjct: 487 EELTK 491



 Score = 24.6 bits (52), Expect = 0.007
 Identities = 15/33 (45%), Positives = 20/33 (60%), Gaps = 1/33 (3%)

Query: 325 LEILKIHTEKMNLKGVDLREVAKIAENMVGADL 357
           LE+ K+  E M L  VD + V K+AEN+ G  L
Sbjct: 177 LEVDKVRGEGMPLT-VDDKAVGKLAENLRGVTL 208