Pairwise Alignments

Query, 184 a.a., Era-like GTP-binding protein from Methanococcus maripaludis S2

Subject, 494 a.a., ribosome biogenesis GTPase Der from Vibrio cholerae E7946 ATCC 55056

 Score = 52.4 bits (124), Expect = 1e-11
 Identities = 46/193 (23%), Positives = 93/193 (48%), Gaps = 27/193 (13%)

Query: 1   MEEHQFKIALVGPENSGKSSLVNSIFGKNISEVSEVGGTTK----MPVKKFWGKIKIGKQ 56
           +++   K+A++G  N GKS+L N I G+    V ++ GTT+    +P+K+          
Sbjct: 201 LQDLPIKLAIIGRPNVGKSTLTNRILGEERVVVYDMPGTTRDSIYIPMKR---------- 250

Query: 57  KINPDFAKITFVDLGGLYAGENRSVVMVGSVLEKTYEEIDDSDLIIHIIDGSTDLFKSFE 116
               D  +   +D  G+   +  +  +    + KT + I+D+++++ ++D   ++  S +
Sbjct: 251 ----DEREYVLIDTAGVRRRKRINETVEKFSVVKTLQAIEDANVVLLVVDARENI--SDQ 304

Query: 117 KLHHLLKFRYR--KPIIVVINKCDLIENSKREDLRKYVEGRLENKAF----FTSSNTYEG 170
            L  LL F     + I++ +NK D +    +E ++K ++ RL    F    F S+    G
Sbjct: 305 DL-SLLGFALNSGRSIVIAVNKWDGLSFDVKEHVKKELDRRLGFVDFARIHFISALHGTG 363

Query: 171 IGELLSTIIEILR 183
           +G L  ++ E  R
Sbjct: 364 VGHLFESVQEAYR 376



 Score = 52.0 bits (123), Expect = 2e-11
 Identities = 37/134 (27%), Positives = 70/134 (52%), Gaps = 14/134 (10%)

Query: 8   IALVGPENSGKSSLVNSIFGKNISEVSEVGGTTKMPVKKFWGKIKIGKQKINPDFAKITF 67
           +ALVG  N GKS+L N +     + V++  G T+    + +G+ K+G+        +   
Sbjct: 5   VALVGRPNVGKSTLFNRLTRTRDALVADFPGLTR---DRKYGQAKLGEH-------EFIV 54

Query: 68  VDLGGLYAGENRSVVMVGSVLEKTYEEIDDSDLIIHIIDGSTDLFKSFEKLHHLLKFRYR 127
           +D GG+   E     +   + +++   ID++D+++ ++DG   L  + E +   L+ R  
Sbjct: 55  IDTGGIDGSEEG---VETKMAQQSLAAIDEADVVLFMVDGRAGLTVADEAIAQHLR-RIE 110

Query: 128 KPIIVVINKCDLIE 141
           KP I+V+NK D I+
Sbjct: 111 KPAILVVNKVDGID 124