Pairwise Alignments

Query, 456 a.a., MFS transporter from Methanococcus maripaludis S2

Subject, 490 a.a., Permease, MFS from Sinorhizobium meliloti 1021

 Score =  142 bits (357), Expect = 3e-38
 Identities = 100/403 (24%), Positives = 187/403 (46%), Gaps = 10/403 (2%)

Query: 7   IVAVVAAISSFLTPFMSTALNLALPSIGTEFSADTILLSWLVTSFLLASSALLLPFGRIA 66
           ++A++  +   L     + L LA+P + +          W++  +     +LL+ FG I 
Sbjct: 20  LIAILPLV--LLVAMDGSILYLAMPHVTSALMPTADQALWILDIYGFVVGSLLIAFGNIG 77

Query: 67  DIIGRKRILLNGLLIFGLSSLMGIFSGSINHLILLRILQGIGSAMIFGTAIAILTSVYP- 125
           D  GR ++++ G  +FG  SL   +S +   LI  R L G+G A +  + +AI+++++P 
Sbjct: 78  DRYGRLKLIITGAAVFGAGSLGAAYSQTPEQLIASRALMGLGGATLLPSGLAIVSALFPD 137

Query: 126 LNERGKALGINIATVYIGLSLGPFLGGILTHYFGWRSIFLFSGITGIITYLIAKRFVLNE 185
              R +A+GI  AT   G ++GP +GG+L   F W ++FL + +  +I ++I    +L E
Sbjct: 138 PRLRAQAIGIFAATFAAGFAIGPLIGGMLLRQFAWGAVFLIN-VPVVIGFMIGAPILLRE 196

Query: 186 WCDAKGETFDYFGSITYIISLVFLVYGF-----ITFTSGGSIFILASLLFGSIFIHREHK 240
                G + D    +     ++   Y         FT    +   A +   ++F  R+ K
Sbjct: 197 VRSTVGGSIDLASLVLSFAGILLFTYSLKNAAAYGFTPTQIVAGAAGIFALALFARRQTK 256

Query: 241 TENPILNIKLLTNNLAFSMSNLAALLNYGATYAVAFLISFYLQSLRGFSAQDAGLILLAQ 300
            E P+L++ L  + + FS++ L  LL+     A  +L   YLQS+ G     A L+ L  
Sbjct: 257 LEYPLLDLGLFRDRI-FSIAILTGLLSLVVWSAAGYLSGVYLQSVLGIDVFAAALLTLPG 315

Query: 301 PLVQAIFSPITGKLSDKVEPRTLASLGMGITCIGLVLFSFIKLDTSIYQIILNLVLLGFG 360
            +V       T ++ +++  +T       +   G+ L  F   +T I   I + ++ G G
Sbjct: 316 AIVLTATCVATARIVERIGRKTALVATHLLIGAGVFLLLFTTTETGIAVFIASTMIAGIG 375

Query: 361 FALFSSPNTNAIMSSVERKFAGVASAMLATVRILGQMTSMAII 403
           + L  S   +  +S+V    AG A ++  T   LG    ++++
Sbjct: 376 YGLSFSLVADIAVSAVPANRAGAAGSIAETSNELGNALGISLL 418



 Score = 35.8 bits (81), Expect = 3e-06
 Identities = 33/123 (26%), Positives = 51/123 (41%), Gaps = 4/123 (3%)

Query: 40  DTILLSWLVTSFLLASSALLLPFGRIADIIGRKRILLNGLLIFGLSSLMGIFSGS---IN 96
           D    + L     +  +A  +   RI + IGRK  L+   L+ G    + +F+ +   I 
Sbjct: 304 DVFAAALLTLPGAIVLTATCVATARIVERIGRKTALVATHLLIGAGVFLLLFTTTETGIA 363

Query: 97  HLILLRILQGIGSAMIFGTAIAILTSVYPLNERGKALGINIATVYIGLSLG-PFLGGILT 155
             I   ++ GIG  + F     I  S  P N  G A  I   +  +G +LG   LG + T
Sbjct: 364 VFIASTMIAGIGYGLSFSLVADIAVSAVPANRAGAAGSIAETSNELGNALGISLLGSLAT 423

Query: 156 HYF 158
             F
Sbjct: 424 LSF 426