Pairwise Alignments

Query, 240 a.a., ABC transporter substrate-binding protein from Methanococcus maripaludis S2

Subject, 261 a.a., ABC-type amino acid transport/signal transduction systems, periplasmic component/domain from Pseudomonas fluorescens FW300-N2E2

 Score = 77.8 bits (190), Expect = 2e-19
 Identities = 58/225 (25%), Positives = 107/225 (47%), Gaps = 15/225 (6%)

Query: 21  SDSNTTTLKDGVLTVGVFKYVPP-AVYEENGELKGYEVELISEIAERMDLKVEYKEYMFS 79
           +D     +K G L V V +  PP      + + +G +++    +A+++ +K+E      +
Sbjct: 25  ADGLEDVVKRGTLKVAVPQDFPPFGSVGPDMKPRGLDIDTAKLLADQLKVKLELTPVNST 84

Query: 80  DLLNAVANNEVDCAISDIAVTPEREKIVSFSRAYSKTDIILVVPKDSDIEKLTDIIGQKV 139
           + +  +   +VD  IS +   PEREK++ FS AY+   + +  P D+ I  L D+ G+ +
Sbjct: 85  NRIPFLTTGKVDLVISSLGKNPEREKVIDFSSAYAPFYLAVFGPPDAAINNLDDLKGKTI 144

Query: 140 GVTAGTIDDDKSSELLKSIDFQVCRYNNHDEL--------YDALESGNVDAIISEENNFE 191
            VT G I+D + +++       + R+ +++           D + SGNV  +   E N +
Sbjct: 145 SVTRGAIEDIELTKVAPE-GTTIKRFEDNNSTIAAYLAGQVDLIASGNVVMVAISERNPK 203

Query: 192 SVQNSSINYLDEPIATVYCGIAVNKDNKELRLKINDIILELEQEG 236
            V    +   D P   VY G  VNK+   L  K+N I+   + +G
Sbjct: 204 RVPALKVKLKDSP---VYVG--VNKNEPALLDKVNQILATAKTDG 243