Pairwise Alignments

Query, 240 a.a., ABC transporter substrate-binding protein from Methanococcus maripaludis S2

Subject, 254 a.a., ABC transporter substrate-binding protein from Methanococcus maripaludis JJ

 Score =  146 bits (369), Expect = 3e-40
 Identities = 80/234 (34%), Positives = 138/234 (58%), Gaps = 5/234 (2%)

Query: 5   VIFSVLLVITSCACISS-DSNTTTLKDGVLTVGVFKYVPPAVYEENGELKGYEVELISEI 63
           +I SVL++ +   CISS      T+  GVLTVG+   +PP  Y E GELKG++++L+ EI
Sbjct: 9   IISSVLILTSFSGCISSYGKEYNTVTPGVLTVGITPEMPPQQYYEEGELKGFDIDLMKEI 68

Query: 64  AERMDLKVEYKEYMFSDLLNAVANNEVDCAISDIAVTPEREKIVSFSRAYSKTDIILVVP 123
           A  M LK E+K Y +     A+ N E+DC +  + ++PER++ + FSRAY +T +++ V 
Sbjct: 69  ANNMGLKPEFKIYEYGGAHEALLNGEIDC-LPSMTISPERKEDMDFSRAYIQTYVVVAVF 127

Query: 124 KDSDIEKLTDIIGQKVGVTAGTIDDDKSSELLKSIDFQVCRYNNHDELYDALESGNVDAI 183
           ++S   +L D+ G+ + V   T  +D + + L SI+  +  Y++   L   + S N+DA+
Sbjct: 128 ENSPYRELKDLNGKNIAVVTNTYTEDWAKDYLGSINANIKSYDSIQGLVSDIYSKNIDAV 187

Query: 184 ISEE---NNFESVQNSSINYLDEPIATVYCGIAVNKDNKELRLKINDIILELEQ 234
           ++++   + +   ++     + E +   Y  IAV KDN +L+ +IND + ELE+
Sbjct: 188 VTDQIQLDYYSKQKSFESRLIFEKMTIEYWAIAVKKDNHDLQNEINDALFELEE 241