Pairwise Alignments

Query, 549 a.a., ATP-binding cassette domain-containing protein from Methanococcus maripaludis S2

Subject, 913 a.a., ABC-type multidrug transport system, ATPase component from Pseudomonas stutzeri RCH2

 Score =  113 bits (283), Expect = 3e-29
 Identities = 130/557 (23%), Positives = 241/557 (43%), Gaps = 99/557 (17%)

Query: 5   VENLTKRYGEKVALDNVSFDVKKGDILGIIGKSGAGKTTLIKILRGVESFDEGKIEV--- 61
           +  ++ RYG+  ALD++S  +    ++G+IG  G GK++L+ ++ G     +G ++V   
Sbjct: 11  ISGVSLRYGKTRALDDLSLSLPARCMVGLIGPDGVGKSSLLALIAGARKLQQGHVQVLDG 70

Query: 62  -CGKTENLREITAIHLQRNFALWAEPAIYNIIRKLYAVRTDSDEGLPLEEEMEEYRKDAT 120
             G   + R +         A   +    N+   L         G    ++ EE      
Sbjct: 71  DMGDAGHRRAVCP-----RIAYMPQGLGKNLYPTLTVFENLEFFGRLFGQDAEERHWRIA 125

Query: 121 EILKLVGLEHKKDAYSNILSGGEKQRLILGRQLAKIYAKNGDGVLLLDEPATMACPASKQ 180
           E+ +  GL    +  +  LSGG KQ+  LG   A I+  +   +L+LDEP T   P S+ 
Sbjct: 126 ELTRSTGLAPFVERPAGKLSGGMKQK--LGLCCALIHDPD---LLILDEPTTGVDPLSRA 180

Query: 181 ILLDVLKNI-NEKLGVTIIV-TSHLPEIHKYLCKSCILIENGKIIMKDTPEKVVDEFLKD 238
              ++++ I +E+  ++++V T+++ E  ++     + ++ G+I+   TP +++     D
Sbjct: 181 QFWELIERIRSERPQMSVLVATAYMDEAQRF--DHLVAMDAGRILATGTPAELLARTNSD 238

Query: 239 MVE-AYDRL----------------SKPTDKTVVEVEDASKRYYVVNGGETLNLKDISFK 281
            +E A+ RL                   +D   +E    + R+     G+ + +  ++F+
Sbjct: 239 SLEQAFIRLLPEAKRSQHRELVIPPQPHSDSIAIEAHGLTMRF-----GDFVAVDQVNFR 293

Query: 282 VKEKEILSILGPSGTGKSVILRLLAGLEAPDKGVVKLEGIDLKDFGWNRMNLRRKIGIMH 341
           +   EI   LG +G GK+  +++L GL    +G   L G   K    + M  R+++G M 
Sbjct: 294 IARGEIFGFLGSNGCGKTTTMKMLTGLLPASEGDALLFG---KPVDPHDMQTRQRVGYMS 350

Query: 342 QEFSLAHYLTVNELLKYRLGVKSIETVESAKLKAAELGISPKMVDGLYQLLDLPETEMRN 401
           Q FSL   LTV + L                             D   +L  LP  E R 
Sbjct: 351 QAFSLYSELTVRQNL-----------------------------DLHARLFHLP-AERRG 380

Query: 402 KLDKIGISEMVVRKLFPAKPVEYDANELLEALDLNKETLNKKPTELSGGEKVRVAMALQL 461
                 + EM+ R         +D     E+L          P+ L  G + R+++A+ +
Sbjct: 381 P----RVQEMLTR---------FDLTGDAESL----------PSSLPLGVRQRLSLAVAV 417

Query: 462 ALEPDILLLDEPFGDLDPLTLREVSNYLKKINDTVGTTIILISHHV-ELIKEISDRAILI 520
              P+IL+LDEP   +DP+        L +++   G TI + +H + E ++   DR  L+
Sbjct: 418 IHNPEILILDEPTSGVDPVARDGFWELLVQLSREDGVTIFISTHFMNEALR--CDRISLM 475

Query: 521 DEGKLLMNGNPEEICEK 537
             G++L +  P+ +  K
Sbjct: 476 HAGRVLDSDTPQALMAK 492



 Score = 81.3 bits (199), Expect = 2e-19
 Identities = 62/237 (26%), Positives = 114/237 (48%), Gaps = 21/237 (8%)

Query: 1   MAVTVENLTKRYGEKVALDNVSFDVKKGDILGIIGKSGAGKTTLIKILRGVESFDEGKIE 60
           +A+    LT R+G+ VA+D V+F + +G+I G +G +G GKTT +K+L G+    EG   
Sbjct: 270 IAIEAHGLTMRFGDFVAVDQVNFRIARGEIFGFLGSNGCGKTTTMKMLTGLLPASEGDAL 329

Query: 61  VCGKTENLREITAI----HLQRNFALWAEPAIYNIIRKLYAVRTDSDEGLPLEEEMEEYR 116
           + GK  +  ++       ++ + F+L++E            VR + D    L     E R
Sbjct: 330 LFGKPVDPHDMQTRQRVGYMSQAFSLYSE----------LTVRQNLDLHARLFHLPAERR 379

Query: 117 -KDATEILKLVGLEHKKDAYSNILSGGEKQRLILGRQLAKIYAKNGDGVLLLDEPATMAC 175
                E+L    L    ++  + L  G +QRL L      +   +   +L+LDEP +   
Sbjct: 380 GPRVQEMLTRFDLTGDAESLPSSLPLGVRQRLSLA-----VAVIHNPEILILDEPTSGVD 434

Query: 176 PASKQILLDVLKNINEKLGVTIIVTSHLPEIHKYLCKSCILIENGKIIMKDTPEKVV 232
           P ++    ++L  ++ + GVTI +++H        C    L+  G+++  DTP+ ++
Sbjct: 435 PVARDGFWELLVQLSREDGVTIFISTHFMN-EALRCDRISLMHAGRVLDSDTPQALM 490



 Score = 67.4 bits (163), Expect = 2e-15
 Identities = 76/298 (25%), Positives = 122/298 (40%), Gaps = 65/298 (21%)

Query: 254 VVEVEDASKRYYVVNGGETLNLKDISFKVKEKEILSILGPSGTGKSVILRLLAGLEAPDK 313
           V E+   S RY     G+T  L D+S  +  + ++ ++GP G GKS +L L+AG     +
Sbjct: 8   VAEISGVSLRY-----GKTRALDDLSLSLPARCMVGLIGPDGVGKSSLLALIAGARKLQQ 62

Query: 314 GVVKLEGIDLKDFGWNRMNLRRKIGIMHQEFSLAHY--LTVNELLKYRLGVKSIETVESA 371
           G V++   D+ D G  R    R I  M Q      Y  LTV E L++  G    +  E  
Sbjct: 63  GHVQVLDGDMGDAGHRRAVCPR-IAYMPQGLGKNLYPTLTVFENLEF-FGRLFGQDAEER 120

Query: 372 KLKAAELGISPKMVDGLYQLLDLPETEMRNKLDKIGISEMVVRKLFPAKPVEYDANELLE 431
             + AEL  S                         G++  V R   PA            
Sbjct: 121 HWRIAELTRST------------------------GLAPFVER---PAG----------- 142

Query: 432 ALDLNKETLNKKPTELSGGEKVRVAMALQLALEPDILLLDEPFGDLDPLTLREVSNYLKK 491
                         +LSGG K ++ +   L  +PD+L+LDEP   +DPL+  +    +++
Sbjct: 143 --------------KLSGGMKQKLGLCCALIHDPDLLILDEPTTGVDPLSRAQFWELIER 188

Query: 492 INDTVGTTIILISHHVELIKEISDRAILIDEGKLLMNGNPEEICEKFIERSNSKFMNQ 549
           I        +L++       +  D  + +D G++L  G P E+    + R+NS  + Q
Sbjct: 189 IRSERPQMSVLVATAYMDEAQRFDHLVAMDAGRILATGTPAEL----LARTNSDSLEQ 242