Pairwise Alignments

Query, 549 a.a., ATP-binding cassette domain-containing protein from Methanococcus maripaludis S2

Subject, 525 a.a., ABC transporter from Pseudomonas syringae pv. syringae B728a

 Score =  143 bits (361), Expect = 1e-38
 Identities = 139/568 (24%), Positives = 271/568 (47%), Gaps = 99/568 (17%)

Query: 3   VTVENLTKRYGEKVALDNVSFDVKKGDILGIIGKSGAGKT----TLIKILRGVESFDEGK 58
           + + +L+  +  +  + N+S DV++G+ L ++G+SG+GK+    +++++L    +   G 
Sbjct: 6   IEIRDLSVAFNGQKVVSNLSLDVRRGECLALVGESGSGKSVTAHSILQLLPRSGTLTTGS 65

Query: 59  IEVCGKT---ENLREITAIHLQRNFALWAEPAIYNIIRKLYAVRTDSDEGLPLEEEM--E 113
           I   G+     + R +  +   R   ++ EP     +  L++V     E L L   +   
Sbjct: 66  ITYRGQQLVGADDRTLRELRGNRIAMIFQEP--MTSLNPLHSVAKQIGETLLLHRGVSGR 123

Query: 114 EYRKDATEILKLVGL---EHKKDAYSNILSGGEKQRLILGRQLAKIYAKNGDGVLLLDEP 170
           E +K   E+L+LVG+   E +  AY + LSGG++QR+++   LA         +L+ DEP
Sbjct: 124 EAQKRIVELLELVGIQQPEKRLKAYPHELSGGQRQRVMIAMALA-----CEPELLIADEP 178

Query: 171 ATMACPASKQILLDVLKNINEKLGVTIIVTSH-LPEIHKYLCKSCILIENGKIIMKD--- 226
            T      ++ +L +LK + ++L +++++ SH L  +H    + C++   G+I+ +    
Sbjct: 179 TTALDVTVQRKILLLLKELQQRLNMSLLLISHDLNLVHSVAQRVCVM-RAGEIVEQSDCK 237

Query: 227 ----TPEKVVDEFLKDMVEAYDRLSKPTDKTVVEVEDASKRYYVVNGG------ETLN-L 275
               +P+      L D   A + L + T +TV++V D  K ++ + GG      E L  +
Sbjct: 238 SLFKSPQHPYSRLLLDAEPAGEPLPRDTRETVLQV-DNLKVWFSLTGGILRRHREYLKAV 296

Query: 276 KDISFKVKEKEILSILGPSGTGKS----VILRLLAGLEAPDKGVVKLEGIDLKDFGWNRM 331
            DIS  ++  + L I+G SG+GKS     ILRLL       +G ++  G  L      +M
Sbjct: 297 DDISLSIERGKTLGIVGESGSGKSTLGQAILRLL-----ESRGSIRFRGQALDGLSQKQM 351

Query: 332 N-LRRKIGIMHQE--FSLAHYLTVNELLKYRLGVKSIETVESAKLKAAELGISPKMVDGL 388
              R+++ ++ Q+   SL+  ++V +++   L V S                +P   D  
Sbjct: 352 RPWRKEMQVVFQDPYGSLSPRMSVAQIISEGLEVHS--------------QYNPAKCD-- 395

Query: 389 YQLLDLPETEMRNKLDKIGISEMVVRKLFPAKPVEYDANELLEALDLNKETLNKKPTELS 448
                    E+   L+++GI                           + ++ ++ P E S
Sbjct: 396 --------AEVIRALEEVGI---------------------------DPQSRHRYPHEFS 420

Query: 449 GGEKVRVAMALQLALEPDILLLDEPFGDLDPLTLREVSNYLKKINDTVGTTIILISHHVE 508
           GG++ R+A+A  L L+P ++LLDEP   LD    ++V   L+++ +  G T + ISH + 
Sbjct: 421 GGQRQRIAIARALVLKPALILLDEPTSALDRTVQKQVVALLRELQEKHGLTYLFISHDLA 480

Query: 509 LIKEISDRAILIDEGKLLMNGNPEEICE 536
           ++K ++   I++ +GK++  G   ++ E
Sbjct: 481 VVKALAHDVIVVKDGKVVERGASHDVFE 508