Pairwise Alignments

Query, 549 a.a., ATP-binding cassette domain-containing protein from Methanococcus maripaludis S2

Subject, 904 a.a., ribosome-associated ATPase/putative transporter RbbA from Rhodopseudomonas palustris CGA009

 Score =  134 bits (336), Expect = 2e-35
 Identities = 138/562 (24%), Positives = 243/562 (43%), Gaps = 102/562 (18%)

Query: 2   AVTVENLTKRYGEKVALDNVSFDVKKGDILGIIGKSGAGKTTLIKILRGVESFDEGKIEV 61
           A  + ++T  YG   ALD+V+ ++  G ++G+IG  G GK+TL+ ++ GV     G  EV
Sbjct: 5   AARLTHVTHTYGATHALDDVTLELPAGKMVGLIGPDGVGKSTLLALIAGVRRIQSG--EV 62

Query: 62  CGKTENLREITAIHLQRNFALWAEPAIYNIIRKLYAVRTDSDE----GLPLEEEMEEYRK 117
                ++R+  A H  ++ A  A      + R LY   +  +     G    +   E   
Sbjct: 63  LALDGDMRD--ARHRAQSAARIAYMP-QGLGRNLYPTLSVFENLDFFGRLFGQGAAERNA 119

Query: 118 DATEILKLVGLEHKKDAYSNILSGGEKQRLILGRQLAKIYAKNGDGVLLLDEPATMACPA 177
              ++L+  GL    D  +  LSGG KQ+L L   L      +   +L+LDEP T   P 
Sbjct: 120 RIADLLRATGLSPFGDRPAGKLSGGMKQKLSLCCALI-----HDPDLLILDEPTTGVDPL 174

Query: 178 SKQILLDVLKNINEKLG--VTIIVTSHLPEIHKYLCKSCILIENGKIIMKDTPEKVVDEF 235
           S++   +++  I ++      ++ T+++ E  ++       + +GK+I   TP ++  + 
Sbjct: 175 SRRQFWELIDRIRKRRPQMSVLVATAYMEEAERF--DWLAALNDGKVIGAGTPAELRAQT 232

Query: 236 LKDMVEA------------------YDRLSKPTDKTVVEVEDASKRYYVVNGGETLNLKD 277
            +  ++A                     L    D   +E E+ + R+     G+   +  
Sbjct: 233 KQPTLDAAFIALLPAEMRANYADVVLPPLPNSGDGYAIEAENLTCRF-----GDFTAVDH 287

Query: 278 ISFKVKEKEILSILGPSGTGKSVILRLLAGLEAPDKGVVKLEG--IDLKDFGWNRMNLRR 335
           ++F++K  EI   LG +G GKS  +++L GL  P +G  +L G  +D  D     M  R+
Sbjct: 288 VNFQIKRGEIFGFLGSNGCGKSTTMKMLTGLLTPTEGEARLFGEVLDASD-----MATRK 342

Query: 336 KIGIMHQEFSLAHYLTVNELLKYRLGVKSIETVESAKLKAAELGISPKMVDGLYQLLDLP 395
           ++G M Q FSL   LTV + L                                 QL +LP
Sbjct: 343 RVGYMSQSFSLYSELTVRQNLLLHA-----------------------------QLFELP 373

Query: 396 ETEMRNKLDKIGISEMVVRKLFPAKPVEYDANELLEALDLNKETLNKKPTELSGGEKVRV 455
             ++ ++     ++EM+ R             +L +A D        +P  L  G + R+
Sbjct: 374 SAQIPDR-----VAEMLTR------------FDLADAAD-------SRPDSLPLGMRQRL 409

Query: 456 AMALQLALEPDILLLDEPFGDLDPLTLREVSNYLKKINDTVGTTIILISHHVELIKEISD 515
            +A+ +   P++L+LDEP   +DP+        L  ++   G TI + +H +    E  D
Sbjct: 410 QLAVAVIHRPEVLILDEPTSGVDPVARDSFWRMLIALSREDGVTIFISTHFMN-EAERCD 468

Query: 516 RAILIDEGKLLMNGNPEEICEK 537
           R  L+  GK+L  G P E+ E+
Sbjct: 469 RISLMHAGKVLAVGAPHELVER 490