Pairwise Alignments

Query, 549 a.a., ATP-binding cassette domain-containing protein from Methanococcus maripaludis S2

Subject, 923 a.a., ABC transporter from Herbaspirillum seropedicae SmR1

 Score =  117 bits (292), Expect = 3e-30
 Identities = 129/555 (23%), Positives = 239/555 (43%), Gaps = 93/555 (16%)

Query: 5   VENLTKRYGEKVALDNVSFDVKKGDILGIIGKSGAGKTTLIKILRGVESFDEGKIEVCGK 64
           ++ +  RYG+ VALD VS D+  G ++G+IG  G GK++L+ ++ G  +  +G++ V G 
Sbjct: 13  LQRVALRYGKTVALDAVSLDIPAGCMVGLIGPDGVGKSSLLSLVAGARALQQGELAVLGG 72

Query: 65  TENLREITAIHLQR---NFALWAEPAIYNIIRKLYAVRTDSDEGLPLEEEMEEYRKDATE 121
               +     H Q+     A   +    N+   L         G    ++  E R+   E
Sbjct: 73  DMRQQR----HRQQACPRIAYMPQGLGKNLYPTLSVEENLQFFGRLFGQDASERRRRIDE 128

Query: 122 ILKLVGLEHKKDAYSNILSGGEKQRLILGRQLAKIYAKNGDGVLLLDEPATMACPASKQI 181
           +    GL+      +  LSGG KQ+L L   L      +   +L+LDEP T   P S+  
Sbjct: 129 LTTSTGLDKFLARPAGKLSGGMKQKLGLCCSLI-----HDPDLLILDEPTTGVDPLSRAQ 183

Query: 182 LLDVLKNI-NEKLGVTIIV-TSHLPEIHKYLCKSCILIENGKIIMKDTP---------EK 230
             D++ +I  ++ G+++IV T+++ E  ++     + ++ G+++   TP           
Sbjct: 184 FWDLIAHIRQQRAGMSVIVATAYMEEADRF--DWLVAMDEGRVLATGTPVQLHQRTGTAS 241

Query: 231 VVDEFLKDMVEAYDRLSK-----PTDKTVVEVEDASKRYYVVNGGETLNLKDISFKVKEK 285
           + + F+  + E   R  +     P D T+        +   +  G+ L +  + F+++  
Sbjct: 242 LEEAFIALLPEEKRRGHQTVQVTPLDDTIDSGVAIEAKGLTMRFGDFLAVDHVDFRIRRG 301

Query: 286 EILSILGPSGTGKSVILRLLAGLEAPDKGVVKLEG--IDLKDFGWNRMNLRRKIGIMHQE 343
           EI   LG +G GKS  +++L GL    +G   L G  ID +D     M  R ++G M Q 
Sbjct: 302 EIFGFLGSNGCGKSTTMKMLTGLLPASEGQAWLFGREIDPRD-----MATRARVGYMSQA 356

Query: 344 FSLAHYLTVNELLKYRLGVKSIETVESAKLKAAELGISPKMVDGLYQLLDLPETEMRNKL 403
           FSL   L+V + L                                 +L  +P  ++  + 
Sbjct: 357 FSLYGELSVRQNLVLHA-----------------------------RLYRVPAEQIAART 387

Query: 404 DKIGISEMVVRKLFPAKPVEYDANELLEALDLNKETLNKKPTELSGGEKVRVAMALQLAL 463
           D     EM  R              LL+ +D         P  L  G + R+++A+ +  
Sbjct: 388 D-----EMARR------------FGLLDVMD-------SLPESLPLGIRQRLSLAVAMVH 423

Query: 464 EPDILLLDEPFGDLDPLTLREVSNYLKKINDTVGTTIILISHHV-ELIKEISDRAILIDE 522
           +P++L+LDEP   +DP+        +  +      TI + +H + E ++   DR  L+  
Sbjct: 424 KPELLILDEPTSGVDPIARDLFWQLMIGLARQDQVTIFISTHFMNEALR--CDRISLMHA 481

Query: 523 GKLLMNGNPEEICEK 537
           G++L++  P+ + ++
Sbjct: 482 GRVLVSATPQALMQQ 496



 Score = 80.1 bits (196), Expect = 3e-19
 Identities = 58/241 (24%), Positives = 122/241 (50%), Gaps = 25/241 (10%)

Query: 1   MAVTVENLTKRYGEKVALDNVSFDVKKGDILGIIGKSGAGKTTLIKILRGVESFDEGKIE 60
           +A+  + LT R+G+ +A+D+V F +++G+I G +G +G GK+T +K+L G+    EG+  
Sbjct: 274 VAIEAKGLTMRFGDFLAVDHVDFRIRRGEIFGFLGSNGCGKSTTMKMLTGLLPASEGQAW 333

Query: 61  VCGKTENLREITAI----HLQRNFALWAEPAI-YNII--RKLYAVRTDSDEGLPLEEEME 113
           + G+  + R++       ++ + F+L+ E ++  N++   +LY V              E
Sbjct: 334 LFGREIDPRDMATRARVGYMSQAFSLYGELSVRQNLVLHARLYRV------------PAE 381

Query: 114 EYRKDATEILKLVGLEHKKDAYSNILSGGEKQRLILGRQLAKIYAKNGDGVLLLDEPATM 173
           +      E+ +  GL    D+    L  G +QRL L   +A ++      +L+LDEP + 
Sbjct: 382 QIAARTDEMARRFGLLDVMDSLPESLPLGIRQRLSLA--VAMVHKPE---LLILDEPTSG 436

Query: 174 ACPASKQILLDVLKNINEKLGVTIIVTSHLPEIHKYLCKSCILIENGKIIMKDTPEKVVD 233
             P ++ +   ++  +  +  VTI +++H        C    L+  G++++  TP+ ++ 
Sbjct: 437 VDPIARDLFWQLMIGLARQDQVTIFISTHFMN-EALRCDRISLMHAGRVLVSATPQALMQ 495

Query: 234 E 234
           +
Sbjct: 496 Q 496