Pairwise Alignments

Query, 549 a.a., ATP-binding cassette domain-containing protein from Methanococcus maripaludis S2

Subject, 489 a.a., putative ABC transporter ATP-binding protein (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  155 bits (393), Expect = 3e-42
 Identities = 150/556 (26%), Positives = 251/556 (45%), Gaps = 115/556 (20%)

Query: 3   VTVENLTKRYGEKVALDNVSFDVKKGDILGIIGKSGAGKTTLIKILRGVESFDEGKIEVC 62
           V V+ ++K YG+  AL  VSF V++G++ G+IG  GAGK+TL +IL  +   D+G   V 
Sbjct: 8   VVVKEISKSYGKVEALKEVSFAVEQGEVFGLIGPDGAGKSTLFRILTTLLLADKGTATVN 67

Query: 63  GKTENLREITAIHLQRNFALWAEPAIYNIIRKLYAVRTDSDEGLPLEEEMEEYRKDATEI 122
           G      ++   + Q    +   P  +++            + L +EE +E +   AT  
Sbjct: 68  G-----LDVVTDYKQIRTKVGYMPGRFSLY-----------QDLSVEENLEFF---ATVF 108

Query: 123 LKLVGLEHK--KDAYSNI----------LSGGEKQRLILGRQLAKIYAKNGDGVLLLDEP 170
             L+   +   KD Y  I          LSGG KQ+L L   L      +   +L LDEP
Sbjct: 109 HTLIQENYDLIKDIYQQIEPFKKRRAGALSGGMKQKLALSCSLI-----HKPDILFLDEP 163

Query: 171 ATMACPASKQILLDVLKNINEKLGVTIIVTSHLPEIHKYLCKSCILIENGKIIMKDTPEK 230
            T   P S++    +L+N+  K G+TIIV++ + +  +  C     I +G++   DTPE+
Sbjct: 164 TTGVDPVSRKEFWQMLRNL-RKQGITIIVSTPIMDEARQ-CDRIAFINHGQVHGIDTPER 221

Query: 231 VVDEFLKDMV------EAYDRLSKPTDKTVVEVEDASKRYYVVNGGETLNLKDISFKVKE 284
           ++ +F   +       E   +++ P    V+EVE  +K +     G    +  ISF+V+ 
Sbjct: 222 ILQKFASILCPPPLEREEAQQMAAP----VIEVEQLTKSF-----GHFTAVDHISFQVQR 272

Query: 285 KEILSILGPSGTGKSVILRLLAGLEAPDKGVVKLEGIDLKDFGWNRMNLRRKIGIMHQEF 344
            EI   LG +G GK+  +R+L GL  P  GV K+ G D+         ++R IG M Q+F
Sbjct: 273 GEIFGFLGANGAGKTTAMRMLCGLSRPTSGVGKVAGYDIFR---EAEQVKRHIGYMSQKF 329

Query: 345 SLAHYLTVNELLKYRLGVKSIETVESAKLKAAELGISPKMVDGLYQLLDLPETEMRNKLD 404
           SL   L V E ++   G+  ++ +E                                   
Sbjct: 330 SLYEDLKVWENIRLFAGIYGMKEME----------------------------------- 354

Query: 405 KIGISEMVVRKLFPAKPVEYDANELLEALDL--NKETLNKKPTELSGGEKVRVAMALQLA 462
                            +E   +ELLE L     ++TL K    L  G K ++A ++ + 
Sbjct: 355 -----------------IEEKTDELLERLGFADERDTLVK---NLPLGWKQKLAFSVSIF 394

Query: 463 LEPDILLLDEPFGDLDPLTLREVSNYLKKINDTVGTTIILISHHVELIKEISDRAILIDE 522
            EP I+ LDEP G +DP T R+    + +  D  G T+ + +H+++  +  +  +I++D 
Sbjct: 395 HEPKIVFLDEPTGGVDPATRRQFWELIYQAADR-GITVFVTTHYMDEAEYCNRISIMVD- 452

Query: 523 GKLLMNGNPEEICEKF 538
           G++     P  + E+F
Sbjct: 453 GQIKALDTPARLKEQF 468



 Score = 90.9 bits (224), Expect = 1e-22
 Identities = 69/252 (27%), Positives = 135/252 (53%), Gaps = 23/252 (9%)

Query: 3   VTVENLTKRYGEKVALDNVSFDVKKGDILGIIGKSGAGKTTLIKILRGVESFDEGKIEVC 62
           + VE LTK +G   A+D++SF V++G+I G +G +GAGKTT +++L G+     G  +V 
Sbjct: 248 IEVEQLTKSFGHFTAVDHISFQVQRGEIFGFLGANGAGKTTAMRMLCGLSRPTSGVGKVA 307

Query: 63  GKTENLREITAI-----HLQRNFALWAEPAIYNIIRKLYAVRTDSDEGLPLEEEMEEYRK 117
           G  +  RE   +     ++ + F+L+ +  ++  IR L+A       G+   +EME   K
Sbjct: 308 G-YDIFREAEQVKRHIGYMSQKFSLYEDLKVWENIR-LFA-------GIYGMKEMEIEEK 358

Query: 118 DATEILKLVGLEHKKDAYSNILSGGEKQRLILGRQLAKIYAKNGDGVLLLDEPATMACPA 177
              E+L+ +G   ++D     L  G KQ+L        +   +   ++ LDEP     PA
Sbjct: 359 -TDELLERLGFADERDTLVKNLPLGWKQKLAF-----SVSIFHEPKIVFLDEPTGGVDPA 412

Query: 178 SKQILLDVLKNINEKLGVTIIVTSHLPEIHKYLCKSCILIENGKIIMKDTPEKVVDEF-L 236
           +++   +++    ++ G+T+ VT+H  +  +Y C    ++ +G+I   DTP ++ ++F +
Sbjct: 413 TRRQFWELIYQAADR-GITVFVTTHYMDEAEY-CNRISIMVDGQIKALDTPARLKEQFGV 470

Query: 237 KDMVEAYDRLSK 248
           + M + + +L++
Sbjct: 471 ETMDDVFQQLAR 482