Pairwise Alignments

Query, 482 a.a., energy conserving hydrogenase EhbF from Methanococcus maripaludis S2

Subject, 487 a.a., NADH-ubiquinone oxidoreductase chain N (EC 1.6.5.3) from Pseudomonas fluorescens FW300-N2E2

 Score =  112 bits (279), Expect = 4e-29
 Identities = 102/414 (24%), Positives = 189/414 (45%), Gaps = 26/414 (6%)

Query: 71  TPVKQL-----IITVIMLIGSLVLIT---------GLGEKKSSGLFVALMLMGLASVSAV 116
           TP+ Q+     +   ++L+ +L  +T         G G   +      L+LM  A    +
Sbjct: 64  TPLMQIDSFACLYMALILVATLACVTLAHAYLGDGGSGYPGNREELYLLILMAAAGGLVL 123

Query: 117 VMADDLFNIYVFYEIAAIAQTGLVI-ASGTEKAYRSAFRYLILGNFAGSILLLGVSMLLA 175
           V A  L ++++  E+ ++   GLV  A   +++  +  +Y++L     + LL G+++L A
Sbjct: 124 VSAQHLASLFIGLELLSVPVYGLVAYAFFNKRSLEAGIKYMVLSAAGSAFLLFGMALLYA 183

Query: 176 ATGTLNITDMHNFLL-NNPATPTIYGGLLMLIIGLCYGSGLPPFHTVKADIYARAKPHVA 234
             GTL+   +   L      +P    GL M++IGL +   L PFH    D+Y  A   VA
Sbjct: 184 EAGTLSFVGIGQALAATGLPSPIAQLGLGMMLIGLAFKLSLVPFHLWTPDVYEGAPAPVA 243

Query: 235 AMLQTYSKFVLVALLLVIFKLFGGLSYFASAHGVLIGLSVLGMVFGVVMALLQTDYKKLL 294
           A L T SK  + A+++ +F++   ++       VL  +++  ++FG ++AL Q++ K+LL
Sbjct: 244 AFLATASKVAVFAVMVRLFQI-SPVASSGVLSNVLTIIAIASILFGNLLALTQSNLKRLL 302

Query: 295 AYHAISQGGYVAAGIALGTPLGIVAGIFHAINHVIYKSALF----LGAHIVERRKEGNLN 350
            Y +I+  GY+   +     L + A   + + +VI     F    L +     R    L 
Sbjct: 303 GYSSIAHFGYLLIALIASKGLAVEAIGVYLVTYVITSLGAFGVITLMSSPYNGRDADALY 362

Query: 351 KLGGLLPVIPATAFMVLCAKLAISGVPPFNGFQSKLLLAEAAMNVNMPELAIIMILVS-I 409
           +  GL    P    ++    L+++G+P   GF  K  +    +  +   L   ++L S I
Sbjct: 363 EYRGLFWRRPYLTAVLTVMMLSLAGIPLTAGFIGKFYIIATGVEAHQWWLVGSLVLGSAI 422

Query: 410 GTFVSMMKAFYLIYLKP-CSQEQLEEYKKAKPSKYAVFSLAVLTFLCILLGIFP 462
           G F  +     L  ++P   +   E + + K     + ++AVL F    LG++P
Sbjct: 423 GVFYYLRVMVTLYLMEPNLRRHDAELHWEQKAGGVMLLAIAVLAF---FLGVYP 473