Pairwise Alignments

Query, 482 a.a., energy conserving hydrogenase EhbF from Methanococcus maripaludis S2

Subject, 502 a.a., NADH dehydrogenase (quinone) (NCBI) from Rhodospirillum rubrum S1H

 Score =  133 bits (335), Expect = 1e-35
 Identities = 114/418 (27%), Positives = 190/418 (45%), Gaps = 18/418 (4%)

Query: 27  LIRPMTLIMAILLLALPFIGSYGIYNFGAHGIENGLISGISYLYTPVKQLIITVIMLIGS 86
           LI   TL MA+ LLA         Y+ G      G+   +  L      L++ ++    S
Sbjct: 36  LIALTTLTMAVGLLAGVLTHGPSAYHLGDWSPPWGIELHVDLL----SALVLVLVTATAS 91

Query: 87  LVLITGLGEKKSS------GLFVALMLMGLASVSAVVMADDLFNIYVFYEIAAIAQTGLV 140
           LV++       +        L   L L+ L  +  + +  D FN++VF EI++++   LV
Sbjct: 92  LVIVYARASFAAEIDPGHHTLAYCLFLLCLTGLLGMAITGDAFNLFVFLEISSLSSYALV 151

Query: 141 IASGTEKAYRSAFRYLILGNFAGSILLLGVSMLLAATGTLNITDMHNFLLNNPATPTIYG 200
                 +A  +A+ YLILG    +  ++G+  L   TGTLN+ D+   L     + T   
Sbjct: 152 ALGRDRRALYAAYHYLILGTVGATFYVIGIGFLYMMTGTLNMNDLAQRLPAVAHSRTAVA 211

Query: 201 GLLMLIIGLCYGSGLPPFHTVKADIYARAKPHVAAMLQTYSK----FVLVALLL-VIFKL 255
           G++ L +GL     L P H      Y+ A   V A L   S     +V+V L L V+   
Sbjct: 212 GVVFLGVGLSLKLALFPLHKWLPAAYSYAPSAVGAFLAATSTKVAFYVMVRLFLGVLAPA 271

Query: 256 FGG--LSYFASAHGVLIGLSVLGMVFGVVMALLQTDYKKLLAYHAISQGGYVAAGIALGT 313
           F    L    SA  +++ L++  ++ G   A+ Q+D K+LLAY ++SQ G +  G++L +
Sbjct: 272 FSANLLPGPVSAREMVMVLALAAILSGSFSAIFQSDAKRLLAYSSVSQIGVMVLGLSLFS 331

Query: 314 PLGIVAGIFHAINHVIYKSALFLGAHIVERR-KEGNLNKLGGLLPVIPATAFMVLCAKLA 372
             G+  G+ H +NH + K++LF+    V  R     +  + G+   +P T    +   L+
Sbjct: 332 LDGVAGGLVHMLNHALIKASLFMALGCVFLRIGSVEIADMAGIGRRMPWTMAAFVIGGLS 391

Query: 373 ISGVPPFNGFQSKLLLAEAAMNVNMPELAIIMILVSIGTFVSMMKAFYLIYLKPCSQE 430
           + G+P   GF SK  LA++A+          +I  S+   V + K     Y +P   E
Sbjct: 392 LIGIPGTAGFISKWQLAQSAIAEGWWLAVAALIASSLLAVVYVGKVIEAAYFRPSPAE 449