Pairwise Alignments

Query, 482 a.a., energy conserving hydrogenase EhbF from Methanococcus maripaludis S2

Subject, 490 a.a., NADH dehydrogenase (quinone) (NCBI) from Rhodospirillum rubrum S1H

 Score =  100 bits (248), Expect = 1e-25
 Identities = 94/372 (25%), Positives = 168/372 (45%), Gaps = 18/372 (4%)

Query: 102 FVALMLMGLASVSAVVMADDLFNIYVFYEIAAIAQTGLVIASGTEKAYRSAFRYLILGNF 161
           F A   + +A    + +A +LF +++FYE   ++   L+   GT +A R+   Y+     
Sbjct: 115 FHAYFALAIACTLGIALAGNLFTLFLFYEALTLSTYPLITHQGTAQAVRAGRIYM----- 169

Query: 162 AGSILLLGVSMLLAATG-TLNITDMHNFLLNNPATPTIYGGLLMLIIGL-CYGSG---LP 216
            G +L+  + +LL A   T ++    +F         I G L+ L++ L  +G+    L 
Sbjct: 170 -GMLLVPSIGLLLVAIILTHSLAGRMDFQPGGILAGRIDGPLVGLLLALFVFGTAKAALM 228

Query: 217 PFHTVKADIYARAKPHVAAMLQTYS--KFVLVALLLVIFKLFG-GLSYFASAHGVLIGLS 273
           PFH           P V+A+L   +  K  +  +  V+  +FG  L   +S  G L  ++
Sbjct: 229 PFHRWLPAAMVAPTP-VSALLHAVAVVKAGVFTIAKVVISIFGIDLLAASSWTGWLTWVA 287

Query: 274 VLGMVFGVVMALLQTDYKKLLAYHAISQGGYVAAGIALGTPLGIVAGIFHAINHVIYKSA 333
            + ++   ++AL Q + K+ LAY  ISQ  YV   ++L +PLG++A   H + H   K  
Sbjct: 288 GISVILASLIALRQDNLKRRLAYSTISQLAYVVMALSLFSPLGVLAAGLHIVVHAFGKIT 347

Query: 334 LFLGAHIVE-RRKEGNLNKLGGLLPVIPATAFMVLCAKLAISGVPPFNGFQSKLLLAEAA 392
           LF  A  +     + ++++  G+   +P T      A L++ G+PP  GF SK  +  AA
Sbjct: 348 LFFAAGAIHTATHKDSVSQFAGIGRAMPWTMGAFAVASLSMIGLPPTAGFLSKWGIFSAA 407

Query: 393 MNVNMPELAIIMILVSIGTFVSMMKAFYLIYLKPCSQEQLEEYKKAKPSKYAVFSLAVLT 452
                  +  ++I  ++      +   +  +LKP   E   +  +A P    V +L +  
Sbjct: 408 FQGQTWGVVAVLIASTVLNAAYFLPILHTAFLKPPPGEAGAKIAEAPP--LMVAALCLTA 465

Query: 453 FLCILLGIFPNL 464
           F  + L   P L
Sbjct: 466 FGTLALFFLPGL 477