Pairwise Alignments

Query, 482 a.a., energy conserving hydrogenase EhbF from Methanococcus maripaludis S2

Subject, 565 a.a., NADH dehydrogenase (quinone) (NCBI) from Rhodospirillum rubrum S1H

 Score =  135 bits (341), Expect = 3e-36
 Identities = 94/348 (27%), Positives = 175/348 (50%), Gaps = 28/348 (8%)

Query: 118 MADDLFNIYVFYEIAAIAQTGLVIASGTEKAYRSAFRYLILGNFAGSILLLGVSMLLAAT 177
           +A DL +++VF+EI A+A T ++ +S    A ++  RY ++  F G++L+ G++      
Sbjct: 111 LAGDLISLFVFWEIMAVASTLVIWSSDQPAAAKAGMRYALMHLFGGAVLMAGIAGHAIGG 170

Query: 178 GTLNITDMHNFLLNNPATPTIYGGLLMLIIGLCYGSGLPPFHTVKADIYARAKPHVAAML 237
           G+L++T M    L++PA         +++IG+   +G PPF    AD Y       +  L
Sbjct: 171 GSLDVTAM---TLDSPAN-------WLILIGVLVNAGAPPFSAWIADAYPEGSFSGSVFL 220

Query: 238 QTYSKFVLVALLLVIFKLFGGLSYFASAHGVLIGLSVLGMVFGVVMALLQTDYKKLLAYH 297
              S F     ++V+ K F G         +LI + +  + +G++ ALL+ D +++L+Y 
Sbjct: 221 ---SAFTTKTAVMVLIKGFPGTE-------LLIWIGLAMVFYGILYALLENDMRRILSYS 270

Query: 298 AISQGGYVAAGIALGTPLGIVAGIFHAINHVIYKSALFLGAHIVERRKEG--NLNKLGGL 355
            ++Q G++   + +GT + +     HA  H++YK+ L + A  V     G     +LGGL
Sbjct: 271 IVNQVGFMVCAVGIGTDMALNGAAAHAFAHILYKALLLMSAGSVLMMTGGKRKCTELGGL 330

Query: 356 LPVIPATAFMVLCAKLAISGVPPFNGFQSKLLLAEAAMNVNMPELAIIMILVSIGTFV-S 414
              +P T    +   LAIS  P  +GF SK ++A+ A + ++  +  ++   S G F+ +
Sbjct: 331 YRSMPITTVCGIIGALAISAFPFTSGFVSKSMIAQGAADQHLVWVWALLQAASAGVFLHA 390

Query: 415 MMKAFYLIYLKPCSQEQLEEYKKAKPSKYAVFSLAVLTFLCILLGIFP 462
            +K  + ++ +  S       + A P      ++ +L   CI LG+FP
Sbjct: 391 GIKFPWFVFFQKDS-----GLRPADPPASMRAAMILLAAACIGLGVFP 433