Pairwise Alignments

Query, 482 a.a., energy conserving hydrogenase EhbF from Methanococcus maripaludis S2

Subject, 487 a.a., Proton-translocating NADH-quinone oxidoreductase, chain N (NCBI) from Rhodospirillum rubrum S1H

 Score =  119 bits (299), Expect = 2e-31
 Identities = 106/406 (26%), Positives = 182/406 (44%), Gaps = 22/406 (5%)

Query: 33  LIMAILLLALPFIGSYGIYNFGAHGIENGLISGISYLYTPVKQLIITVIMLIGSLVLITG 92
           L+MA+ ++ L          FG   I++G        Y     L+  V+ L+ S+V +  
Sbjct: 47  LLMALAVVGLGAAPETPQLAFGGLFIDDGFAR-----YAKALTLLGAVLTLLLSMVWLKR 101

Query: 93  LGEKKSSGLFVALMLMGLASVSAVVMADDLFNIYVFYEIAAIAQTGLVIASGTE---KAY 149
             E +    F  L+L     +  ++ A+DL  +Y+  E+ ++A    VIA+      K+ 
Sbjct: 102 ENEGRFE--FPILVLFATIGMMMMISANDLIALYMGLELQSLAL--YVIAAYQRDNLKST 157

Query: 150 RSAFRYLILGNFAGSILLLGVSMLLAATGTLNITDMHNFLLNNPATPT-IYGGLLMLIIG 208
            +  +Y +LG  A  +LL G+S++    GT     +           T +  G++ +I G
Sbjct: 158 EAGLKYFVLGALASGLLLYGMSLVYGFAGTTRFDGLAQVAAAEGGISTGLLIGIVFIIAG 217

Query: 209 LCYGSGLPPFHTVKADIYARAKPHVAAMLQTYSKFVLVALLLVIFKLFGGLSYFASA-HG 267
           L +     PFH    D+Y  A   V A      K  + AL L    + G  + +A     
Sbjct: 218 LAFKVSAVPFHMWAPDVYEGAPTPVTAFFAVAPK--IAALTLFARVMMGPFAAYADQWQQ 275

Query: 268 VLIGLSVLGMVFGVVMALLQTDYKKLLAYHAISQGGYVAAGIALGTPLGIVAGIFHAINH 327
           V+I +S+L M+ G   A++QT+ K+L+AY +I   GY   GIA GT  G+   + +   +
Sbjct: 276 VIILISILSMLLGGFAAIVQTNIKRLMAYSSIGHVGYALIGIAAGTTEGVRGVLVYLAIY 335

Query: 328 VIYKSALFLGAHIVERRKEG----NLNKLGGLLPVIPATAFMVLCAKLAISGVPPFNGFQ 383
           +      F    I+  R++G     +N L GL    P  A  +     +++GVPP  GF 
Sbjct: 336 LFMNVGTF--TVILAMRQKGRAVEGINDLAGLSKQHPMMAAAMAVFMFSMAGVPPLAGFF 393

Query: 384 SKLLLAEAAMNVNMPELAIIMILVSIGTFVSMMKAFYLIYLKPCSQ 429
            K  +  AA+N  +  LA+I +L S+      ++   L+Y    ++
Sbjct: 394 GKFYVFMAAVNSGLFALAVIGVLSSVVAAFYYLRIIKLMYFDEATE 439