Pairwise Alignments

Query, 482 a.a., energy conserving hydrogenase EhbF from Methanococcus maripaludis S2

Subject, 505 a.a., NADH dehydrogenase (quinone) (NCBI) from Rhodospirillum rubrum S1H

 Score =  112 bits (279), Expect = 4e-29
 Identities = 102/388 (26%), Positives = 178/388 (45%), Gaps = 52/388 (13%)

Query: 72  PVKQLIITVIMLIGSLVLITGLGEKKSSGL----------FVALMLMGLASVSAVVMADD 121
           P+  L++ VI L G LV++   G      +          +   + + + ++  +V + +
Sbjct: 98  PLSCLMLVVITLCGFLVVLYSGGYMSLGNVEHPSDANLARYYFFVCLFITAMVGLVSSPN 157

Query: 122 LFNIYVFYEIAAIAQTGLVIASGTEKAYRSAFRYLILGNFAGSILLLGVSMLLAATGTLN 181
            F +++F+E+  +   GL+   G  +A +SA++ L++ + AG  L   V ++   TG+  
Sbjct: 158 YFQLFLFWELTTLCSWGLISFYGDAEALKSAYKALLITHGAGLFLAAAVVLIYVETGSFA 217

Query: 182 ITDMHNFLLNNPATPTIYGGLLMLIIGLCYGSGLP-----PFHTVKADIYARAKP----- 231
             D  N L     TP    GL  L+I     + L      PF T      A   P     
Sbjct: 218 F-DAINLL-----TP----GLKSLVIAFMGIAALAKAAQFPFFTWLPTAMAAPTPASSYL 267

Query: 232 HVAAMLQTYSKFVLVALLLVIFKLFGGLSYFASAHGVLIG-LSVLGMVFGVVMALLQTDY 290
           H AAM++        A + ++ +L   +  F    G+ +  ++++ M   VV+   Q D 
Sbjct: 268 HAAAMVK--------AGIYLLARLALSVDAFPPELGLALSVIAIVTMCLAVVLYFPQDDL 319

Query: 291 KKLLAYHAISQGGYVAAGI---ALGTPLGIVAGIFHAINHVIYKSALFLG----AHIVER 343
           K+LLA+  I+  GY+  GI   A+G+   +  G+ H + H   KS LFL     ++    
Sbjct: 320 KRLLAFSTIANLGYMVLGIAMGAMGSRTALEGGMLHLVGHSFTKSLLFLAVGAISYATGT 379

Query: 344 RKEGNLNKLGGLLPVIPATAFMVLCAKLAISGVPPFNGFQSKLLLAEAAMNVNMP---EL 400
           RK G L+ LG  +PV   TA   +   +AISG+PPFN F SK L+   A+ ++      L
Sbjct: 380 RKIGLLSGLGRKMPV---TALAFVLGAMAISGMPPFNMFWSKYLIVSGAIELSSTWGWTL 436

Query: 401 AIIMILVSIGTFVSMMKAFYLIYLKPCS 428
           A++ +  S+  F   +   + ++  P S
Sbjct: 437 AVLTLAESVAGFAWFLHIVHKVFFGPVS 464