Pairwise Alignments

Query, 482 a.a., energy conserving hydrogenase EhbF from Methanococcus maripaludis S2

Subject, 515 a.a., NADH-quinone oxidoreductase subunit M from Phaeobacter inhibens DSM 17395

 Score =  115 bits (287), Expect = 5e-30
 Identities = 124/505 (24%), Positives = 220/505 (43%), Gaps = 54/505 (10%)

Query: 2   NLLPLIVVFP-MFVAIIFNYLNGKDKLIRPMTLIMAILLLALPFIGSYGIY------NFG 54
           NLL ++   P +  AI+  +L G+D+  +     +A+    + F+ S GIY      + G
Sbjct: 3   NLLSIVTFIPALAAAILALFLRGEDEAAQRNAKSVALFATTITFLVSLGIYFQFDPSDTG 62

Query: 55  AHGIENG-LISGISYLY--TPVKQLIITVIMLIGSLVLITGLGEKKSSGLFVALMLMGLA 111
              +E    I G+ Y      +  L + +   +  L ++   G       ++   LM   
Sbjct: 63  FQFVEEAEWIFGLKYKMGVDGISVLFVMLTTFVMPLTILASWGVNTRVKEYMIAFLMLET 122

Query: 112 SVSAVVMADDLFNIYVFYEIAAIAQTGLV-IASGTEKAYRSAFRYLILGNFAGSILLLGV 170
            +  V +A DL   Y+F+E   I    ++ I  G E+ Y S F++ +   F   ++L+ +
Sbjct: 123 LMLGVFIALDLVLFYLFFEAGLIPMFLIIGIWGGKERIYAS-FKFFLYTFFGSVLMLVAM 181

Query: 171 SMLLAATGTLNITDM--HNFLLNNPATPTIY--GG---LLMLIIGLCYGSGLP--PFHTV 221
             + A  GT +I  +  H+F   +     I+  GG   LL L     +   +P  P HT 
Sbjct: 182 VAMYADAGTTDIAQLLTHSFSAGSFDLLGIHVVGGMQTLLFLAFFASFAVKMPMWPVHTW 241

Query: 222 KADIYARAKPHVAAMLQTYSKFVLVALLLVIFKLFGGLSYFASA-----------HGVLI 270
             D + +A         T    VL A+LL +    GG  +   +             +++
Sbjct: 242 LPDAHVQAP--------TAGSVVLAAILLKM----GGYGFLRFSLPMFPVGADVMTDLIL 289

Query: 271 GLSVLGMVFGVVMALLQTDYKKLLAYHAISQGGYVAAGIALGTPLGIVAGIFHAINHVIY 330
            +S + +V+  ++AL+Q+D KKL+AY +++  G+V  GI      GI   IF  ++H   
Sbjct: 290 WMSAIAVVYTSLVALVQSDMKKLIAYSSVAHMGFVTMGIFAANQQGIDGAIFQMLSHGFI 349

Query: 331 KSALFLGAHIV-ERRKEGNLNKLGGLLPVIPATAFMVLCAKLAISGVPPFNGFQSKLLLA 389
            +ALFL   ++ +R    +++  GGL+  +PA A + +   +   G+P  +GF  + L  
Sbjct: 350 SAALFLCVGVIYDRMHTRDIDAYGGLVIRMPAYALVFMFFTMGNVGLPGTSGFIGEFLTL 409

Query: 390 EAAMNVNMPELAIIMILVSIGTFVSMMKAFYL---IYLKPCSQEQLEEYKKAKPSKYAVF 446
                 N      +  + + G   S   A +L   +      +  L+  K     +  +F
Sbjct: 410 MGTFQKN----TWVAAVAATGVIFSAGYALWLYRRVVFGDLIKGSLKTIKDMTARERFIF 465

Query: 447 SLAVLTFLCILLGIFPNLATDIIYP 471
             A L  + ILLG++P L TDII P
Sbjct: 466 --APLVVMTILLGVYPALVTDIISP 488