Pairwise Alignments

Query, 482 a.a., energy conserving hydrogenase EhbF from Methanococcus maripaludis S2

Subject, 643 a.a., NADH dehydrogenase I, chain L (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  114 bits (285), Expect = 1e-29
 Identities = 102/388 (26%), Positives = 182/388 (46%), Gaps = 22/388 (5%)

Query: 51  YNFGAHGIENGLISGISYLYTPVKQLIITVIMLIGSLVLITGLGEKKSSGLF---VALML 107
           YNF        L   +  L  P+  +++ VI  +  +V I   G  K    F    A + 
Sbjct: 69  YNFTWLPFTETLRFDLGILLDPISVMMLIVISTVSLMVHIYSFGYMKGETGFQRYYAFLS 128

Query: 108 MGLASVSAVVMADDLFNIYVFYEIAAIAQTGLVIASGTEKAYRSAFRY-LILGNFAGSIL 166
           +   S+  +V+A ++F +Y+F+E+  ++   L+    T+ A  +A +   I+  FA    
Sbjct: 129 LFTMSMLGLVVATNIFQMYLFWELVGVSSYLLIGFYYTKPAAIAASKKAFIVTRFADLGF 188

Query: 167 LLGVSMLLAATGTLNITDMHNFLLNNPAT--PTIYGGLLMLIIGLCYGSGLPPFHTVKAD 224
           L+G+ +     GT   T     L++  A+  P   G   ++ IG    S + P H    D
Sbjct: 189 LIGILIYGYYGGTFGFTPDTVSLISGGASMLPLALG---LMFIGGAGKSAMFPLHIWLPD 245

Query: 225 IYARAKPHVAAMLQTYSKFVL-VALLLVIFKLFGGLSYFASAHGVLIGLSVLGMVFGVVM 283
                 P V+A++   +  V  V L+  +F LF  ++Y      ++  +      +   +
Sbjct: 246 AMEGPTP-VSALIHAATMVVAGVYLVARMFPLF--IAYAPDTLHMIAWVGAFTAFYAASV 302

Query: 284 ALLQTDYKKLLAYHAISQGGYVAAGIALGTP-------LGIVAGIFHAINHVIYKSALFL 336
           A +Q+D K++LA+  ISQ G++   + + T        LG +A +FH   H ++K+ LFL
Sbjct: 303 ACVQSDIKRVLAFSTISQIGFMMVALGVCTSMDPHHGGLGYMASMFHLFTHAMFKALLFL 362

Query: 337 GA-HIVERRKEGNLNKLGGLLPVIPATAFMVLCAKLAISGVPPFNGFQSKLLLAEAAMNV 395
           GA  I+       ++ +GGL   +P T +  L A LAI+G+PPF+GF SK  +  A    
Sbjct: 363 GAGSIIHAVHSNEMSAMGGLRKYMPITHWTFLIACLAIAGIPPFSGFFSKDEILAACFQY 422

Query: 396 NMPELAIIMILVSIGTFVSMMKAFYLIY 423
           + P +  +M +++  T   M + +Y I+
Sbjct: 423 S-PAMGWVMTVIAAMTAFYMFRLYYGIF 449