Pairwise Alignments

Query, 253 a.a., Na(+)/H(+) antiporter subunit B from Methanococcus maripaludis S2

Subject, 930 a.a., NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit from Pseudomonas stutzeri RCH2

 Score = 53.1 bits (126), Expect = 2e-11
 Identities = 43/165 (26%), Positives = 82/165 (49%), Gaps = 13/165 (7%)

Query: 45  NLITAVLFDWRGFDTLGECMIL-VTSVLVTGMVFGRGLFETEFLKEVYSDSKTESENENG 103
           N++  +L D+RGFDTLGE  +L +  V +  +++G  L     +++      +  ++   
Sbjct: 731 NVVNVILVDFRGFDTLGEIAVLAIAGVGIYSLLYGLRLPHP--IRDAGGRLWSLDKHPMM 788

Query: 104 FTSIIKVLAMPFSILLMALGISIILGGHITPGGGFQGGSLIAAAYILSIVAFG---SKTP 160
             ++ + L +P ++L+ A    I L GH  PGGGF  G + A A IL  +A G   ++  
Sbjct: 789 LDALARAL-LPMALLISAF---IFLRGHNLPGGGFIAGLITAVALILQYIAHGVAWAQAR 844

Query: 161 IKFKHHFLESLESFGAILFMSLGVLGIIVSGYYLFNFGDLFGYPV 205
             F +H   ++   G ++  + G+  ++    +L +  D F  P+
Sbjct: 845 QPFSYH---AMCGAGLLIAGATGLGSLLFGHSFLTSAFDHFHLPL 886



 Score = 25.0 bits (53), Expect = 0.006
 Identities = 21/78 (26%), Positives = 37/78 (47%), Gaps = 6/78 (7%)

Query: 168 LESLESFGAILFMSLGVLGIIVSGYYLFN---FGDLFGYPVFLSPSGLENTGIIPYLNIA 224
           L+ L    A+L + +G+L I+ + YYL      G  +G+ +    + L   G++   N+ 
Sbjct: 74  LDGLGFLFALLILGIGLLVILYARYYLSKKDPMGRFYGFFLLFMGAML---GVVLSENLL 130

Query: 225 VGLKVLAGLSTITFLLTG 242
           + L      S  +FLL G
Sbjct: 131 LMLMFWELTSLSSFLLIG 148