Pairwise Alignments

Query, 253 a.a., Na(+)/H(+) antiporter subunit B from Methanococcus maripaludis S2

Subject, 891 a.a., proton-conducting membrane transporter from Vibrio cholerae E7946 ATCC 55056

 Score = 52.8 bits (125), Expect = 2e-11
 Identities = 46/181 (25%), Positives = 82/181 (45%), Gaps = 25/181 (13%)

Query: 17  GSAIIYSLFNINA--VEGVNYIYTQNYIVP-----NLITAVLFDWRGFDTLGECMILVTS 69
           G+++   L NI A  ++     Y     VP     N++  +L D+R FDTLGE +++V +
Sbjct: 682 GASVTLILLNITAHPIDTTLSDYFAQQSVPGGHGRNIVNVILVDFRAFDTLGEVIVVVMA 741

Query: 70  VLVTGMVFGRGLFETEFLKEVYSDSKTESENENGFTSIIKVLAMPFSILLMALGISIILG 129
            LV   +  +    TE  ++++S              I    A   + L++   + ++L 
Sbjct: 742 SLVAISLLPK---RTEQPQKIHS-------------LIFATTAHIVTALMLMFSLYLLLR 785

Query: 130 GHITPGGGFQGGSLIAAAYILSIVAFGSKTPIKFKHHFLE-SLESFGAILFMSLGVLGII 188
           GH  PGGGF G  +    + L + A  S   ++ + HF   ++  FG +L    G + + 
Sbjct: 786 GHNAPGGGFIGALIAVIGFSLLLFA-ESPQYVRDRLHFSPLNIALFGILLSFMAGAMSVA 844

Query: 189 V 189
           V
Sbjct: 845 V 845