Pairwise Alignments
Query, 481 a.a., 4Fe-4S binding protein from Methanococcus maripaludis S2
Subject, 649 a.a., hypothetical protein from Phaeobacter inhibens DSM 17395
Score = 53.1 bits (126), Expect = 3e-11
Identities = 43/162 (26%), Positives = 62/162 (38%), Gaps = 23/162 (14%)
Query: 286 GKILYDPKTCTLCNTCVKECPQGV-----RINKGEFVDGGCVLCELCIKECPEDAISIKE 340
G +L CTLC +CV CP G + + F + C+ C LC CPEDAI+ +
Sbjct: 492 GAVLVSSDNCTLCLSCVSLCPSGALGDNPDLPQLRFQEDACLQCGLCATICPEDAITYEP 551
Query: 341 RSKFTS-------IDKEECIACGTCSMVCPNDAITVVIDSLNFSGNKVHSKVIFNDNCVI 393
R T + +EE AC C + + ID + HS D +
Sbjct: 552 RLNLTPDALSQVVLHEEEPFACVECGSLF---GVKSTIDKITEKLAGKHSMFANPDAARM 608
Query: 394 CEKCAIHCPRDVIENTSGHKK---VVDRENSYIRTDNDYCVK 432
+ C D N H++ + +RT DY K
Sbjct: 609 IQMC-----DDCRVNAQFHQQNSPFAGADRPKVRTTEDYLSK 645
Score = 49.3 bits (116), Expect = 4e-10
Identities = 24/92 (26%), Positives = 38/92 (41%), Gaps = 1/92 (1%)
Query: 306 PQGVRINKGEFVDGGCVLCELCIKECPEDAISIKERSKFTSIDKEECIACGTCSMVCPND 365
P+G C LC C+ CP A+ ++ C+ CG C+ +CP D
Sbjct: 486 PEGAPYGAVLVSSDNCTLCLSCVSLCPSGALGDNPDLPQLRFQEDACLQCGLCATICPED 545
Query: 366 AITVVIDSLNFSGNKVHSKVIFNDNCVICEKC 397
AIT LN + + + V+ + C +C
Sbjct: 546 AITYE-PRLNLTPDALSQVVLHEEEPFACVEC 576
Score = 46.6 bits (109), Expect = 3e-09
Identities = 20/61 (32%), Positives = 30/61 (49%), Gaps = 8/61 (13%)
Query: 385 VIFNDNCVICEKCAIHCPRDVIENTSGHKKVVDRENSYIRTDNDYCVKCGLCTIICPNDA 444
++ +DNC +C C CP + + + +R D C++CGLC ICP DA
Sbjct: 495 LVSSDNCTLCLSCVSLCPSGALGDNP--------DLPQLRFQEDACLQCGLCATICPEDA 546
Query: 445 I 445
I
Sbjct: 547 I 547
Score = 45.8 bits (107), Expect = 4e-09
Identities = 23/67 (34%), Positives = 36/67 (53%), Gaps = 11/67 (16%)
Query: 222 YGQV---TENCILCGNCISKCPKDVL-EISEFKVVKTKEDVKAKPEKHCINCGLCVDKCP 277
YG V ++NC LC +C+S CP L + + ++ +ED C+ CGLC CP
Sbjct: 491 YGAVLVSSDNCTLCLSCVSLCPSGALGDNPDLPQLRFQEDA-------CLQCGLCATICP 543
Query: 278 SNALRFE 284
+A+ +E
Sbjct: 544 EDAITYE 550
Score = 44.3 bits (103), Expect = 1e-08
Identities = 23/70 (32%), Positives = 30/70 (42%), Gaps = 5/70 (7%)
Query: 65 YGGYYVNRKLCTGCGICKNVCPIDIIDIREDSTGKSYPTGMCVMCGLCTTECP-----YN 119
YG V+ CT C C ++CP + D + C+ CGLC T CP Y
Sbjct: 491 YGAVLVSSDNCTLCLSCVSLCPSGALGDNPDLPQLRFQEDACLQCGLCATICPEDAITYE 550
Query: 120 ARLYFDPSSL 129
RL P +L
Sbjct: 551 PRLNLTPDAL 560
Score = 40.8 bits (94), Expect = 1e-07
Identities = 17/57 (29%), Positives = 27/57 (47%), Gaps = 7/57 (12%)
Query: 173 SISIDSKKCVECGKCIYLCPKDTIIEAEMV-------DGCTRCNICNEVCPVDAIEY 222
++ + S C C C+ LCP + + + D C +C +C +CP DAI Y
Sbjct: 493 AVLVSSDNCTLCLSCVSLCPSGALGDNPDLPQLRFQEDACLQCGLCATICPEDAITY 549
Score = 40.4 bits (93), Expect = 2e-07
Identities = 19/45 (42%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
Query: 324 CELCIKECPEDAISIKERSKFTSIDKEECIACGTCSMVCPNDAIT 368
C C+ CP AIS SID C CG+C+ +CP+ AIT
Sbjct: 278 CTRCLDICPTGAIS--PAGDHVSIDPMICAGCGSCASLCPSGAIT 320
Score = 38.9 bits (89), Expect = 5e-07
Identities = 16/41 (39%), Positives = 24/41 (58%), Gaps = 4/41 (9%)
Query: 24 SKCMEVCPTNAIKM----IDGKAFSCITCGTCAKECPTGAI 60
++C+++CPT AI + C CG+CA CP+GAI
Sbjct: 279 TRCLDICPTGAISPAGDHVSIDPMICAGCGSCASLCPSGAI 319
Score = 38.1 bits (87), Expect = 9e-07
Identities = 14/40 (35%), Positives = 19/40 (47%)
Query: 269 CGLCVDKCPSNALRFENGKILYDPKTCTLCNTCVKECPQG 308
C C+D CP+ A+ + DP C C +C CP G
Sbjct: 278 CTRCLDICPTGAISPAGDHVSIDPMICAGCGSCASLCPSG 317
Score = 38.1 bits (87), Expect = 9e-07
Identities = 16/48 (33%), Positives = 23/48 (47%), Gaps = 1/48 (2%)
Query: 44 SCITCGTCAKECPTGAIKKN-EYGGYYVNRKLCTGCGICKNVCPIDII 90
+C C +C CP+GA+ N + C CG+C +CP D I
Sbjct: 500 NCTLCLSCVSLCPSGALGDNPDLPQLRFQEDACLQCGLCATICPEDAI 547
Score = 35.8 bits (81), Expect = 5e-06
Identities = 23/71 (32%), Positives = 29/71 (40%), Gaps = 8/71 (11%)
Query: 76 TGCGICKNVCPIDIIDIREDSTGKSYPTGMCVMCGLCTTECPYNARLYFDPSSLKNTKNK 135
TGC C ++CP I D S +C CG C + CP A Y P +
Sbjct: 276 TGCTRCLDICPTGAISPAGDHV--SIDPMICAGCGSCASLCPSGAITYDAPPT------D 327
Query: 136 MLMERYSTIFK 146
LM R T+ K
Sbjct: 328 ALMRRIQTLTK 338
Score = 35.8 bits (81), Expect = 5e-06
Identities = 16/40 (40%), Positives = 23/40 (57%), Gaps = 3/40 (7%)
Query: 48 CGTCAKECPTGAIKKNEYGGYY-VNRKLCTGCGICKNVCP 86
C C CPTGAI + G + ++ +C GCG C ++CP
Sbjct: 278 CTRCLDICPTGAI--SPAGDHVSIDPMICAGCGSCASLCP 315
Score = 33.5 bits (75), Expect = 2e-05
Identities = 15/54 (27%), Positives = 21/54 (38%), Gaps = 6/54 (11%)
Query: 423 IRTDNDYCVKCGLCTIICPNDAIDKG------EINTEKCEYCSACVNICPTRAI 470
+ +D C C C +CP+ A+ + C C C ICP AI
Sbjct: 494 VLVSSDNCTLCLSCVSLCPSGALGDNPDLPQLRFQEDACLQCGLCATICPEDAI 547
Score = 30.8 bits (68), Expect = 1e-04
Identities = 15/52 (28%), Positives = 19/52 (36%), Gaps = 10/52 (19%)
Query: 394 CEKCAIHCPRDVIENTSGHKKVVDRENSYIRTDNDYCVKCGLCTIICPNDAI 445
C +C CP I H + D C CG C +CP+ AI
Sbjct: 278 CTRCLDICPTGAISPAGDHVSI----------DPMICAGCGSCASLCPSGAI 319
Score = 30.0 bits (66), Expect = 2e-04
Identities = 15/46 (32%), Positives = 20/46 (43%), Gaps = 5/46 (10%)
Query: 204 GCTRCNICNEVCPVDAIEYGQVTEN-----CILCGNCISKCPKDVL 244
G T C C ++CP AI + C CG+C S CP +
Sbjct: 274 GQTGCTRCLDICPTGAISPAGDHVSIDPMICAGCGSCASLCPSGAI 319
Score = 30.0 bits (66), Expect = 2e-04
Identities = 13/41 (31%), Positives = 21/41 (51%), Gaps = 6/41 (14%)
Query: 26 CMEVCPTNAI------KMIDGKAFSCITCGTCAKECPTGAI 60
C+ +CP+ A+ + + +C+ CG CA CP AI
Sbjct: 507 CVSLCPSGALGDNPDLPQLRFQEDACLQCGLCATICPEDAI 547
Score = 28.9 bits (63), Expect = 6e-04
Identities = 11/23 (47%), Positives = 12/23 (52%)
Query: 174 ISIDSKKCVECGKCIYLCPKDTI 196
+SID C CG C LCP I
Sbjct: 297 VSIDPMICAGCGSCASLCPSGAI 319
Score = 28.5 bits (62), Expect = 7e-04
Identities = 14/53 (26%), Positives = 20/53 (37%), Gaps = 8/53 (15%)
Query: 232 CGNCISKCPKDVLEISEFKVVKTKEDVKAKPEKHCINCGLCVDKCPSNALRFE 284
C C+ CP + + V P C CG C CPS A+ ++
Sbjct: 278 CTRCLDICPTGAIS-------PAGDHVSIDP-MICAGCGSCASLCPSGAITYD 322