Pairwise Alignments
Query, 481 a.a., 4Fe-4S binding protein from Methanococcus maripaludis S2
Subject, 181 a.a., 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein (RefSeq) from Shewanella loihica PV-4
Score = 54.7 bits (130), Expect = 2e-12
Identities = 30/82 (36%), Positives = 40/82 (48%), Gaps = 9/82 (10%)
Query: 44 SCITCGT--CAKECPTGAIKKNEYGGYYVNRKLCTGCGICKNVCPIDIIDIREDSTGKSY 101
SC+ C C CP A + G ++R+ CTGCG+C + CP + IRED GK+
Sbjct: 60 SCMHCENPACLMVCPAKAYHVRDDGIVVLDREKCTGCGLCASACPYAAVSIREDD-GKAD 118
Query: 102 PTGMCV------MCGLCTTECP 117
MCV M C + CP
Sbjct: 119 KCNMCVELLDRGMKPACVSGCP 140
Score = 50.8 bits (120), Expect = 4e-11
Identities = 34/143 (23%), Positives = 56/143 (39%), Gaps = 28/143 (19%)
Query: 349 KEECIACGTCSMVC------PNDAITVVIDSLNFSGNKVHSKVIFNDNCVICEK--CAIH 400
+E C+ CG C++ C P + +D + V + +C+ CE C +
Sbjct: 13 QENCVGCGACTVACQIHNELPENHRFRKVDRYEVKRDDGAIDVWLSHSCMHCENPACLMV 72
Query: 401 CPRDVIENTSGHKKVVDRENSYIRTDNDYCVKCGLCTIICPNDAID--KGEINTEKCEYC 458
CP K R++ + D + C CGLC CP A+ + + +KC C
Sbjct: 73 CPA---------KAYHVRDDGIVVLDREKCTGCGLCASACPYAAVSIREDDGKADKCNMC 123
Query: 459 ---------SACVNICPTRAIRI 472
ACV+ CP + +
Sbjct: 124 VELLDRGMKPACVSGCPVECLDV 146
Score = 43.1 bits (100), Expect = 7e-09
Identities = 36/172 (20%), Positives = 63/172 (36%), Gaps = 18/172 (10%)
Query: 106 CVMCGLCTTECPYNARLYFDPSSLKNTKNKMLMERYSTIFKMMGKTYEFPEPKHVKIVKP 165
CV CG CT C + L + K + ++ + + + P + +
Sbjct: 16 CVGCGACTVACQIHNELPENHRFRKVDRYEVKRDDGAIDVWLSHSCMHCENPACLMVCPA 75
Query: 166 AERKLRHS--ISIDSKKCVECGKCIYLCPKDTIIEAEMVDGCTRCNICNEVCPVDAIEYG 223
+R + +D +KC CG C CP + E +CN+C V+ ++ G
Sbjct: 76 KAYHVRDDGIVVLDREKCTGCGLCASACPYAAVSIREDDGKADKCNMC-----VELLDRG 130
Query: 224 QVTENCILCGNCISKCPKDVLEISEFKVVKTKEDVKAKPEKHCINCGLCVDK 275
C+S CP + L++ + V + K I G C+ K
Sbjct: 131 MKPA-------CVSGCPVECLDVGNLQEVLKRPSA----SKQGIGYGDCITK 171
Score = 42.4 bits (98), Expect = 1e-08
Identities = 25/109 (22%), Positives = 48/109 (44%), Gaps = 13/109 (11%)
Query: 263 EKHCINCGLCVDKCPSNALRFENGKILYDPKTCTLCNTCVKECPQGVRINKGEFVDGGCV 322
+++C+ CG C C + EN + + VK + + ++ C+
Sbjct: 13 QENCVGCGACTVACQIHNELPENHRFR------KVDRYEVKRDDGAIDV----WLSHSCM 62
Query: 323 LCE--LCIKECPEDAISIKERSKFTSIDKEECIACGTCSMVCPNDAITV 369
CE C+ CP A +++ +D+E+C CG C+ CP A+++
Sbjct: 63 HCENPACLMVCPAKAYHVRDDG-IVVLDREKCTGCGLCASACPYAAVSI 110
Score = 38.5 bits (88), Expect = 2e-07
Identities = 31/107 (28%), Positives = 46/107 (42%), Gaps = 13/107 (12%)
Query: 379 NKVHSKVIFNDNCVICEKCAIHCP-RDVIENTSGHKKV----VDRENSYIRTDNDY-CVK 432
NK V +NCV C C + C + + +KV V R++ I + C+
Sbjct: 4 NKKVGFVFRQENCVGCGACTVACQIHNELPENHRFRKVDRYEVKRDDGAIDVWLSHSCMH 63
Query: 433 C--GLCTIICPNDAI---DKG--EINTEKCEYCSACVNICPTRAIRI 472
C C ++CP A D G ++ EKC C C + CP A+ I
Sbjct: 64 CENPACLMVCPAKAYHVRDDGIVVLDREKCTGCGLCASACPYAAVSI 110
Score = 35.8 bits (81), Expect = 1e-06
Identities = 37/142 (26%), Positives = 43/142 (30%), Gaps = 42/142 (29%)
Query: 179 KKCVECGKCIYLCP---------------------KDTIIEAEMVDGCTRCN--ICNEVC 215
+ CV CG C C D I+ + C C C VC
Sbjct: 14 ENCVGCGACTVACQIHNELPENHRFRKVDRYEVKRDDGAIDVWLSHSCMHCENPACLMVC 73
Query: 216 PVDAIEY---GQVT---ENCILCGNCISKCPKDVLEISEFKVVKTKEDVKAKPEKHCINC 269
P A G V E C CG C S CP + I E +D KA C+
Sbjct: 74 PAKAYHVRDDGIVVLDREKCTGCGLCASACPYAAVSIRE-------DDGKADKCNMCVEL 126
Query: 270 ------GLCVDKCPSNALRFEN 285
CV CP L N
Sbjct: 127 LDRGMKPACVSGCPVECLDVGN 148
Score = 34.7 bits (78), Expect = 3e-06
Identities = 28/125 (22%), Positives = 48/125 (38%), Gaps = 37/125 (29%)
Query: 227 ENCILCGNCISKC------PKD--VLEISEFKVVKTKEDVKAKPEKHCINCG--LCVDKC 276
ENC+ CG C C P++ ++ ++V + + C++C C+ C
Sbjct: 14 ENCVGCGACTVACQIHNELPENHRFRKVDRYEVKRDDGAIDVWLSHSCMHCENPACLMVC 73
Query: 277 PSNALRF-ENGKILYDPKTCTLCNTCVKECPQGVRINKGEFVDGGCVLCELCIKECPEDA 335
P+ A ++G ++ D + CT C LC CP A
Sbjct: 74 PAKAYHVRDDGIVVLDREKCTGCG--------------------------LCASACPYAA 107
Query: 336 ISIKE 340
+SI+E
Sbjct: 108 VSIRE 112