Pairwise Alignments

Query, 481 a.a., 4Fe-4S binding protein from Methanococcus maripaludis S2

Subject, 393 a.a., 4Fe-4S binding protein from Methanococcus maripaludis JJ

 Score =  114 bits (284), Expect = 8e-30
 Identities = 88/324 (27%), Positives = 133/324 (41%), Gaps = 68/324 (20%)

Query: 13  EECEDCKNKEISKCMEVCPTNAIKMIDGKAF----------SCITCGTCAKECPT----- 57
           E+C  C     S C E CP++AI M   + F          SCI CG C + CPT     
Sbjct: 47  EKCISC-----SACKESCPSDAISMEFNEEFKKEMPVFDAGSCINCGNCVESCPTNVLEM 101

Query: 58  GAIKKN---------EYGGYYVNRKLCTGCGICKNVCPIDIIDIREDSTGK-SYPTGMCV 107
           G ++K          +     ++ ++C  CG C+N CP+D I    ++TG       +CV
Sbjct: 102 GTLRKEAKELLWNVPKIINLLIDEEICVSCGTCENACPVDAIS--HNNTGLYEIDVNICV 159

Query: 108 MCGLCTTECPY-NARLYFDPSSLKNTKNKMLMERYSTIFKMMGKTYEFPEPKHVKIVKPA 166
            C  C   CP  NA + +D   L    ++ +    +T F       +F E   V    P 
Sbjct: 160 SCKNCLKVCPVENAIVTYDEPGL----SEKIEIAQNTKFDRERLGSDFKEESDVIAEIPR 215

Query: 167 ERKLRHSISIDSKKCVECGKCIYLCPKDTIIEAEMVDGCTRCNICNEVCPVDAIEYG--- 223
                    I    C+ CG C+ +CP    +E   V  C +   C EVCP  AI  G   
Sbjct: 216 ---------IVPSLCIGCGNCVDVCPGSIDLERLKVTSCIKSGKCLEVCPTTAIRIGVPE 266

Query: 224 QVT-----------ENCILCGNCISKCPKDVLEISEFKVVKTKEDVKAKPEKHCINCGLC 272
           ++T           E CI C  C   C      + E  ++  + ++     ++C+ CGLC
Sbjct: 267 KITKRTAECYIVDEEKCIGCRICYRAC-----NVPEAILISKETNLPYINPEYCVRCGLC 321

Query: 273 VDKCPSNA---LRFENGKILYDPK 293
            + CP +A   L+ E  + LY  +
Sbjct: 322 QNACPVDAIDYLKTETSEDLYSKR 345



 Score =  110 bits (275), Expect = 9e-29
 Identities = 84/317 (26%), Positives = 130/317 (41%), Gaps = 77/317 (24%)

Query: 200 EMVDGCTRCNICNEVCPVDAI--EYGQVTE---------NCILCGNCISKCPKDVLEISE 248
           ++ + C  C+ C E CP DAI  E+ +  +         +CI CGNC+  CP +VLE+  
Sbjct: 44  DLPEKCISCSACKESCPSDAISMEFNEEFKKEMPVFDAGSCINCGNCVESCPTNVLEMGT 103

Query: 249 FKVVKTKEDVKAKP--------EKHCINCGLCVDKCPSNALRFEN-GKILYDPKTCTLCN 299
            +  + KE +   P        E+ C++CG C + CP +A+   N G    D   C  C 
Sbjct: 104 LRK-EAKELLWNVPKIINLLIDEEICVSCGTCENACPVDAISHNNTGLYEIDVNICVSCK 162

Query: 300 TCVKECP--------------------QGVRINKGEF-----------------VDGGCV 322
            C+K CP                    Q  + ++                    V   C+
Sbjct: 163 NCLKVCPVENAIVTYDEPGLSEKIEIAQNTKFDRERLGSDFKEESDVIAEIPRIVPSLCI 222

Query: 323 LCELCIKECPEDAISIKERSKFTSIDKEECIACGTCSMVCPNDAITVVIDSLNFSGNKVH 382
            C  C+  CP  +I + ER K TS     CI  G C  VCP  AI + +     +     
Sbjct: 223 GCGNCVDVCP-GSIDL-ERLKVTS-----CIKSGKCLEVCPTTAIRIGVPE-KITKRTAE 274

Query: 383 SKVIFNDNCVICEKC--AIHCPRDVIENTSGHKKVVDRENSYIRTDNDYCVKCGLCTIIC 440
             ++  + C+ C  C  A + P  ++         + +E +    + +YCV+CGLC   C
Sbjct: 275 CYIVDEEKCIGCRICYRACNVPEAIL---------ISKETNLPYINPEYCVRCGLCQNAC 325

Query: 441 PNDAIDKGEINTEKCEY 457
           P DAID  +  T +  Y
Sbjct: 326 PVDAIDYLKTETSEDLY 342